RNA–Protein interactions for RNA: ENST00000516473.1

RNU6-1089P-201, Transcript of RNA, U6 small nuclear 1089, pseudogene, humanhuman

BASIC

Gene RNU6-1089P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1089P-201ENST00000516473 AEBP2Q6ZN18 517 aaPredicted RBP7.21□□□□□ -1.26
RNU6-1089P-201ENST00000516473 POTEDQ86YR6 584 aa6.73□□□□□ -1.33
RNU6-1089P-201ENST00000516473 CHIC1Q5VXU3 224 aa6.71□□□□□ -1.34
RNU6-1089P-201ENST00000516473 SENP3Q9H4L4 574 aaPredicted RBP6.24□□□□□ -1.41
RNU6-1089P-201ENST00000516473 PHF23Q9BUL5 403 aaPredicted RBP6.08□□□□□ -1.44
RNU6-1089P-201ENST00000516473 FOXD1Q16676 465 aa5.91□□□□□ -1.46
RNU6-1089P-201ENST00000516473 MSH5O43196 834 aa5.76□□□□□ -1.49
RNU6-1089P-201ENST00000516473 PIAS4Q8N2W9 510 aaPredicted RBP5.35□□□□□ -1.55
RNU6-1089P-201ENST00000516473 CACNB1Q02641 598 aaPredicted RBP5.34□□□□□ -1.55
RNU6-1089P-201ENST00000516473 POTEHQ6S545 545 aa5.14□□□□□ -1.59
RNU6-1089P-201ENST00000516473 PPP6R1Q9UPN7 881 aa5.04□□□□□ -1.6
RNU6-1089P-201ENST00000516473 ADRA2BP18089 450 aa4.98□□□□□ -1.61
RNU6-1089P-201ENST00000516473 RNF39Q9H2S5 420 aa4.87□□□□□ -1.63
RNU6-1089P-201ENST00000516473 DMRT2Q9Y5R5 561 aa4.85□□□□□ -1.63
RNU6-1089P-201ENST00000516473 MAPK8IP2Q13387 824 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1089P-201ENST00000516473 C1QBPQ07021 282 aaKnown RBP4.75□□□□□ -1.65
RNU6-1089P-201ENST00000516473 DCAF8L1A6NGE4 600 aa4.68□□□□□ -1.66
RNU6-1089P-201ENST00000516473 PLPPR3Q6T4P5 718 aa4.67□□□□□ -1.66
RNU6-1089P-201ENST00000516473 SCAF1Q9H7N4 1312 aaKnown RBP4.54□□□□□ -1.68
RNU6-1089P-201ENST00000516473 SP7Q8TDD2 431 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1089P-201ENST00000516473 PLSCR2Q9NRY7 297 aa4.51□□□□□ -1.69
RNU6-1089P-201ENST00000516473 HOXD11P31277 338 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1089P-201ENST00000516473 DNAJC5BQ9UF47 199 aa4.4□□□□□ -1.71
RNU6-1089P-201ENST00000516473 DSG3P32926 999 aa4.34□□□□□ -1.71
RNU6-1089P-201ENST00000516473 CHRDL2Q6WN34 429 aa4.32□□□□□ -1.72
RNU6-1089P-201ENST00000516473 LHX8Q68G74 356 aa4.23□□□□□ -1.73
RNU6-1089P-201ENST00000516473 CAPN15O75808 1086 aa4.21□□□□□ -1.74
RNU6-1089P-201ENST00000516473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNU6-1089P-201ENST00000516473 RNF216Q9NWF9 866 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1089P-201ENST00000516473 SPINK5Q9NQ38 1064 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1089P-201ENST00000516473 HAX1O00165 279 aa4.18□□□□□ -1.74
RNU6-1089P-201ENST00000516473 RBM42Q9BTD8 480 aaKnown RBP4.14□□□□□ -1.75
RNU6-1089P-201ENST00000516473 EVX2Q03828 476 aa4.1□□□□□ -1.75
RNU6-1089P-201ENST00000516473 CNKSR2Q8WXI2 1034 aa4.09□□□□□ -1.75
RNU6-1089P-201ENST00000516473 PIP4P2Q8N4L2 257 aa4.08□□□□□ -1.76
RNU6-1089P-201ENST00000516473 U3KPZ7 1027 aaPredicted RBP4.06□□□□□ -1.76
RNU6-1089P-201ENST00000516473 ABCB7O75027 752 aa4.05□□□□□ -1.76
RNU6-1089P-201ENST00000516473 POTEMA6NI47 508 aa4.02□□□□□ -1.77
RNU6-1089P-201ENST00000516473 PPP4R3CPQ6ZMV5 832 aa4.02□□□□□ -1.77
RNU6-1089P-201ENST00000516473 TRHP20396 242 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1089P-201ENST00000516473 PCDH10Q9P2E7 1040 aa3.99□□□□□ -1.77
RNU6-1089P-201ENST00000516473 POTEGQ6S5H5 508 aa3.98□□□□□ -1.77
RNU6-1089P-201ENST00000516473 GABBR2O75899 941 aa3.96□□□□□ -1.78
RNU6-1089P-201ENST00000516473 FXR2P51116 673 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU6-1089P-201ENST00000516473 ZNF219Q9P2Y4 722 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1089P-201ENST00000516473 AKT1S1Q96B36 256 aa3.92□□□□□ -1.78
RNU6-1089P-201ENST00000516473 REM2Q8IYK8 340 aaPredicted RBP3.89□□□□□ -1.79
RNU6-1089P-201ENST00000516473 POTEIP0CG38 1075 aa3.88□□□□□ -1.79
RNU6-1089P-201ENST00000516473 C19orf67A6NJJ6 358 aa3.85□□□□□ -1.79
RNU6-1089P-201ENST00000516473 PITPNM1O00562 1244 aa3.85□□□□□ -1.79
RNU6-1089P-201ENST00000516473 APLP2Q06481 763 aa3.85□□□□□ -1.79
RNU6-1089P-201ENST00000516473 OTUD5Q96G74 571 aa3.85□□□□□ -1.79
RNU6-1089P-201ENST00000516473 PRKAR2AP13861 404 aaKnown RBP3.75□□□□□ -1.81
RNU6-1089P-201ENST00000516473 POLA2Q14181 598 aa3.74□□□□□ -1.81
RNU6-1089P-201ENST00000516473 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
RNU6-1089P-201ENST00000516473 POTEB2H3BUK9 544 aa3.73□□□□□ -1.81
RNU6-1089P-201ENST00000516473 DCBLD2Q96PD2 775 aa3.71□□□□□ -1.82
RNU6-1089P-201ENST00000516473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1089P-201ENST00000516473 HNRNPUL2Q1KMD3 747 aaKnown RBP3.7□□□□□ -1.82
RNU6-1089P-201ENST00000516473 CDAN1Q8IWY9 1227 aa3.69□□□□□ -1.82
RNU6-1089P-201ENST00000516473 FAM163AQ96GL9 167 aaPredicted RBP3.69□□□□□ -1.82
RNU6-1089P-201ENST00000516473 MMRN1Q13201 1228 aa3.67□□□□□ -1.82
RNU6-1089P-201ENST00000516473 CLCN6P51797 869 aa3.66□□□□□ -1.82
RNU6-1089P-201ENST00000516473 NCBP3Q53F19 620 aaKnown RBP3.66□□□□□ -1.82
RNU6-1089P-201ENST00000516473 SAMD1Q6SPF0 538 aaPredicted RBP3.65□□□□□ -1.83
RNU6-1089P-201ENST00000516473 SLC4A2P04920 1241 aa3.63□□□□□ -1.83
RNU6-1089P-201ENST00000516473 OSCARQ8IYS5 282 aa3.63□□□□□ -1.83
RNU6-1089P-201ENST00000516473 NPM3O75607 178 aaKnown RBP3.61□□□□□ -1.83
RNU6-1089P-201ENST00000516473 SPNS2Q8IVW8 549 aa3.61□□□□□ -1.83
RNU6-1089P-201ENST00000516473 ZBTB12Q9Y330 459 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1089P-201ENST00000516473 CD44P16070 742 aaKnown RBP3.58□□□□□ -1.84
RNU6-1089P-201ENST00000516473 POTEJP0CG39 1038 aa3.57□□□□□ -1.84
RNU6-1089P-201ENST00000516473 CHADLQ6NUI6 762 aa3.57□□□□□ -1.84
RNU6-1089P-201ENST00000516473 CLEC11AQ9Y240 323 aa3.57□□□□□ -1.84
RNU6-1089P-201ENST00000516473 MAMSTRQ6ZN01 415 aa3.56□□□□□ -1.84
RNU6-1089P-201ENST00000516473 SPDYE1Q8NFV5 336 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1089P-201ENST00000516473 GALR2O43603 387 aaPredicted RBP3.51□□□□□ -1.85
RNU6-1089P-201ENST00000516473 PELP1Q8IZL8 1130 aaKnown RBP3.51□□□□□ -1.85
RNU6-1089P-201ENST00000516473 ZNF579Q8NAF0 562 aaKnown RBP3.5□□□□□ -1.85
RNU6-1089P-201ENST00000516473 SCUBE2Q9NQ36 999 aa3.49□□□□□ -1.85
RNU6-1089P-201ENST00000516473 METRNQ9UJH8 293 aa3.47□□□□□ -1.85
RNU6-1089P-201ENST00000516473 FARP1Q9Y4F1 1045 aaPredicted RBP3.46□□□□□ -1.86
RNU6-1089P-201ENST00000516473 C7P10643 843 aa3.45□□□□□ -1.86
RNU6-1089P-201ENST00000516473 ST18O60284 1047 aa3.44□□□□□ -1.86
RNU6-1089P-201ENST00000516473 SLC39A7Q92504 469 aa3.44□□□□□ -1.86
RNU6-1089P-201ENST00000516473 ZRANB1Q9UGI0 708 aa3.44□□□□□ -1.86
RNU6-1089P-201ENST00000516473 SPDYE2BA6NHP3 402 aa3.43□□□□□ -1.86
RNU6-1089P-201ENST00000516473 SPDYE6P0CI01 402 aa3.43□□□□□ -1.86
RNU6-1089P-201ENST00000516473 SPDYE2Q495Y8 402 aa3.43□□□□□ -1.86
RNU6-1089P-201ENST00000516473 PRR29P0C7W0 189 aa3.41□□□□□ -1.86
RNU6-1089P-201ENST00000516473 ASTLQ6HA08 431 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1089P-201ENST00000516473 ATMINO43313 823 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1089P-201ENST00000516473 POTEFA5A3E0 1075 aa3.34□□□□□ -1.87
RNU6-1089P-201ENST00000516473 MYCNP04198 464 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1089P-201ENST00000516473 PHF12Q96QT6 1004 aa3.34□□□□□ -1.87
RNU6-1089P-201ENST00000516473 ATF5Q9Y2D1 282 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1089P-201ENST00000516473 TMEM121BQ9BXQ6 578 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1089P-201ENST00000516473 KRTAP3-3Q9BYR6 98 aa3.33□□□□□ -1.88
RNU6-1089P-201ENST00000516473 KRTAP3-2Q9BYR7 98 aa3.33□□□□□ -1.88
RNU6-1089P-201ENST00000516473 SSUH2Q9Y2M2 353 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms