Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.29-201ENST00000362570 113 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.105-201ENST00000363182 111 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.183-201ENST00000363882 113 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 RNU6-338P-201ENST00000383888 105 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 PPIAP9-201ENST00000403866 498 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 CYCSP33-201ENST00000414485 327 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 RPL21P38-201ENST00000418090 167 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 AC004383.1-201ENST00000438135 289 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 OR2AO1P-201ENST00000476497 403 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 RNU5B-3P-201ENST00000516601 115 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 TRAV32-201ENST00000553993 340 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 AL049872.1-201ENST00000556323 322 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 CPDP1-201ENST00000579660 283 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 AC079776.5-201ENST00000641920 211 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 AC239868.2-201ENST00000564237 4527 ntBASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PCDHB11Q9Y5F2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 ZNF285B-201ENST00000561698 1767 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AC025470.1-201ENST00000510053 2032 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AL672167.1-205ENST00000641112 3080 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 THAP12P5-201ENST00000405864 2275 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AP005432.1-201ENST00000580891 3485 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 RNU1-19P-201ENST00000363306 165 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 RNA5SP500-201ENST00000364486 119 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 RNU6-933P-201ENST00000384424 107 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.539-201ENST00000384635 107 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 MIR628-201ENST00000385229 95 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AL591034.2-201ENST00000402839 359 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 RNU2-43P-201ENST00000410306 190 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 RNU4-34P-201ENST00000410431 124 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 RNU6-121P-201ENST00000410525 99 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 MTATP6P29-201ENST00000415057 132 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 SSXP9-201ENST00000417503 292 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 DPPA2P2-201ENST00000418220 897 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 HMGB1P27-201ENST00000431429 603 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 RPEP5-201ENST00000441137 268 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 NDUFB1P2-201ENST00000449477 176 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AC009120.1-201ENST00000493458 473 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 RNA5SP34-201ENST00000516887 130 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AC136777.2-201ENST00000522979 358 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AC130289.1-201ENST00000577321 73 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 MIR4716-201ENST00000579628 84 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AL158827.2-201ENST00000602494 330 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AL133481.2-203ENST00000607558 139 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 RN7SL544P-201ENST00000617232 284 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 SNORD39.4-201ENST00000620099 78 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 RN7SL763P-201ENST00000620922 284 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AL691447.3-201ENST00000635020 330 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AL355834.1-201ENST00000556602 3965 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms