RNA–Protein interactions for RNA: ENST00000519550.1

LINC01289-201, Transcript of long intergenic non-protein coding RNA 1289, humanhuman

TSL 1 (best) BASIC

Gene LINC01289, Length 3,712 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01289-201ENST00000519550 CHIC1Q5VXU3 224 aa11.47□□□□□ -0.57
LINC01289-201ENST00000519550 NISCHQ9Y2I1 1504 aa11.36□□□□□ -0.59
LINC01289-201ENST00000519550 AEBP2Q6ZN18 517 aaPredicted RBP11.21□□□□□ -0.61
LINC01289-201ENST00000519550 PHF23Q9BUL5 403 aaPredicted RBP10.46□□□□□ -0.74
LINC01289-201ENST00000519550 EHMT2Q96KQ7 1210 aa10.36□□□□□ -0.75
LINC01289-201ENST00000519550 CCDC180Q9P1Z9 1646 aa10.35□□□□□ -0.75
LINC01289-201ENST00000519550 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
LINC01289-201ENST00000519550 PLPPR3Q6T4P5 718 aa9.85□□□□□ -0.83
LINC01289-201ENST00000519550 KCNA4P22459 653 aa9.76□□□□□ -0.85
LINC01289-201ENST00000519550 MYO15BQ96JP2 1530 aa9.7□□□□□ -0.86
LINC01289-201ENST00000519550 DCAF1Q9Y4B6 1507 aa9.68□□□□□ -0.86
LINC01289-201ENST00000519550 CSRNP3Q8WYN3 585 aa9.62□□□□□ -0.87
LINC01289-201ENST00000519550 RTN4Q9NQC3 1192 aaKnown RBP9.59□□□□□ -0.87
LINC01289-201ENST00000519550 ZCCHC6Q5VYS8 1495 aaKnown RBP9.58□□□□□ -0.88
LINC01289-201ENST00000519550 NACADO15069 1562 aa9.49□□□□□ -0.89
LINC01289-201ENST00000519550 ADRA2BP18089 450 aa9.47□□□□□ -0.89
LINC01289-201ENST00000519550 UNC13AQ9UPW8 1703 aa9.4□□□□□ -0.91
LINC01289-201ENST00000519550 RB1CC1Q8TDY2 1594 aa9.39□□□□□ -0.91
LINC01289-201ENST00000519550 ABCC9O60706 1549 aa9.3□□□□□ -0.92
LINC01289-201ENST00000519550 SHROOM4Q9ULL8 1493 aa9.3□□□□□ -0.92
LINC01289-201ENST00000519550 SLC4A1APQ9BWU0 796 aaKnown RBP9.25□□□□□ -0.93
LINC01289-201ENST00000519550 BICRAQ9NZM4 1560 aa9.18□□□□□ -0.94
LINC01289-201ENST00000519550 AMER1Q5JTC6 1135 aaPredicted RBP9.13□□□□□ -0.95
LINC01289-201ENST00000519550 ZBTB22O15209 634 aa9.09□□□□□ -0.95
LINC01289-201ENST00000519550 PPP6R1Q9UPN7 881 aa9.06□□□□□ -0.96
LINC01289-201ENST00000519550 PRKCSHP14314 528 aaPredicted RBP9.05□□□□□ -0.96
LINC01289-201ENST00000519550 SCRIBQ14160 1630 aa9.02□□□□□ -0.97
LINC01289-201ENST00000519550 SENP3Q9H4L4 574 aaPredicted RBP8.96□□□□□ -0.97
LINC01289-201ENST00000519550 PEG3Q9GZU2 1588 aa8.95□□□□□ -0.98
LINC01289-201ENST00000519550 NCBP3Q53F19 620 aaKnown RBP8.86□□□□□ -0.99
LINC01289-201ENST00000519550 SMARCA4P51532 1647 aa8.84□□□□□ -0.99
LINC01289-201ENST00000519550 EIF4G1Q04637 1599 aaKnown RBP8.81□□□□□ -1
LINC01289-201ENST00000519550 BAZ1AQ9NRL2 1556 aaPredicted RBP8.81□□□□□ -1
LINC01289-201ENST00000519550 SMARCA2P51531 1590 aa8.81□□□□□ -1
LINC01289-201ENST00000519550 NPM3O75607 178 aaKnown RBP8.79□□□□□ -1
LINC01289-201ENST00000519550 HMGXB3Q12766 1538 aa8.78□□□□□ -1
LINC01289-201ENST00000519550 PPP4R3CPQ6ZMV5 832 aa8.73□□□□□ -1.01
LINC01289-201ENST00000519550 PRDM2Q13029 1718 aa8.72□□□□□ -1.01
LINC01289-201ENST00000519550 CC2D2AQ9P2K1 1620 aa8.71□□□□□ -1.02
LINC01289-201ENST00000519550 MROH2BQ7Z745 1585 aa8.67□□□□□ -1.02
LINC01289-201ENST00000519550 NCAPD3P42695 1498 aa8.67□□□□□ -1.02
LINC01289-201ENST00000519550 FKBP8Q14318 412 aa8.65□□□□□ -1.02
LINC01289-201ENST00000519550 CECR2Q9BXF3 1484 aa8.65□□□□□ -1.03
LINC01289-201ENST00000519550 TOP2AP11388 1531 aaKnown RBP8.65□□□□□ -1.03
LINC01289-201ENST00000519550 WIZO95785 1651 aa8.63□□□□□ -1.03
LINC01289-201ENST00000519550 ATAD2BQ9ULI0 1458 aa8.62□□□□□ -1.03
LINC01289-201ENST00000519550 TAOK2Q9UL54 1235 aa8.62□□□□□ -1.03
LINC01289-201ENST00000519550 TIMELESSQ9UNS1 1208 aa8.62□□□□□ -1.03
LINC01289-201ENST00000519550 RSF1Q96T23 1441 aaPredicted RBP8.59□□□□□ -1.03
LINC01289-201ENST00000519550 TPRNQ4KMQ1 711 aa8.56□□□□□ -1.04
LINC01289-201ENST00000519550 DAXXQ9UER7 740 aaPredicted RBP8.56□□□□□ -1.04
LINC01289-201ENST00000519550 DCAF8L2P0C7V8 631 aa8.54□□□□□ -1.04
LINC01289-201ENST00000519550 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
LINC01289-201ENST00000519550 HAP1P54257 671 aaPredicted RBP8.53□□□□□ -1.04
LINC01289-201ENST00000519550 TULP1O00294 542 aaPredicted RBP8.51□□□□□ -1.05
LINC01289-201ENST00000519550 FOXD1Q16676 465 aa8.5□□□□□ -1.05
LINC01289-201ENST00000519550 PABPN1Q86U42 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC01289-201ENST00000519550 LAMC3Q9Y6N6 1575 aa8.49□□□□□ -1.05
LINC01289-201ENST00000519550 BAZ1BQ9UIG0 1483 aaKnown RBP8.49□□□□□ -1.05
LINC01289-201ENST00000519550 BCANQ96GW7 911 aa8.45□□□□□ -1.06
LINC01289-201ENST00000519550 FOXD4L1Q9NU39 408 aa8.44□□□□□ -1.06
LINC01289-201ENST00000519550 CFTRP13569 1480 aa8.39□□□□□ -1.07
LINC01289-201ENST00000519550 THOC2Q8NI27 1593 aaKnown RBP8.38□□□□□ -1.07
LINC01289-201ENST00000519550 KIF21AQ7Z4S6 1674 aa8.37□□□□□ -1.07
LINC01289-201ENST00000519550 CCDC88BA6NC98 1476 aa8.37□□□□□ -1.07
LINC01289-201ENST00000519550 BIVM-ERCC5R4GMW8 1640 aa8.36□□□□□ -1.07
LINC01289-201ENST00000519550 WDR97A6NE52 1622 aa8.35□□□□□ -1.07
LINC01289-201ENST00000519550 FBLN2P98095 1184 aa8.33□□□□□ -1.08
LINC01289-201ENST00000519550 KDM2AQ9Y2K7 1162 aa8.31□□□□□ -1.08
LINC01289-201ENST00000519550 WDR62O43379 1518 aa8.31□□□□□ -1.08
LINC01289-201ENST00000519550 DNAJC5BQ9UF47 199 aa8.3□□□□□ -1.08
LINC01289-201ENST00000519550 CADPSQ9ULU8 1353 aa8.26□□□□□ -1.09
LINC01289-201ENST00000519550 TOP2BQ02880 1626 aa8.25□□□□□ -1.09
LINC01289-201ENST00000519550 DNMBPQ6XZF7 1577 aa8.25□□□□□ -1.09
LINC01289-201ENST00000519550 ARXQ96QS3 562 aa8.23□□□□□ -1.09
LINC01289-201ENST00000519550 ABCC8Q09428 1581 aa8.23□□□□□ -1.09
LINC01289-201ENST00000519550 PIAS4Q8N2W9 510 aaPredicted RBP8.22□□□□□ -1.09
LINC01289-201ENST00000519550 TARBP1Q13395 1621 aaKnown RBP8.21□□□□□ -1.1
LINC01289-201ENST00000519550 CUX2O14529 1486 aa8.19□□□□□ -1.1
LINC01289-201ENST00000519550 MRC2Q9UBG0 1479 aa8.19□□□□□ -1.1
LINC01289-201ENST00000519550 PDS5BQ9NTI5 1447 aa8.18□□□□□ -1.1
LINC01289-201ENST00000519550 FANCD2Q9BXW9 1451 aa8.18□□□□□ -1.1
LINC01289-201ENST00000519550 NESP48681 1621 aa8.18□□□□□ -1.1
LINC01289-201ENST00000519550 GTF3C3Q9Y5Q9 886 aa8.18□□□□□ -1.1
LINC01289-201ENST00000519550 CEP164Q9UPV0 1460 aa8.17□□□□□ -1.1
LINC01289-201ENST00000519550 ABCA5Q8WWZ7 1642 aa8.17□□□□□ -1.1
LINC01289-201ENST00000519550 CUX1P39880 1505 aa8.16□□□□□ -1.1
LINC01289-201ENST00000519550 URB2Q14146 1524 aaKnown RBP8.16□□□□□ -1.1
LINC01289-201ENST00000519550 SYNJ1O43426 1573 aa8.16□□□□□ -1.1
LINC01289-201ENST00000519550 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
LINC01289-201ENST00000519550 PBRM1Q86U86 1689 aa8.13□□□□□ -1.11
LINC01289-201ENST00000519550 CNKSR2Q8WXI2 1034 aa8.13□□□□□ -1.11
LINC01289-201ENST00000519550 VSIG10Q8N0Z9 540 aa8.11□□□□□ -1.11
LINC01289-201ENST00000519550 ABCA10Q8WWZ4 1543 aa8.09□□□□□ -1.11
LINC01289-201ENST00000519550 HOMEZQ8IX15 550 aa8.07□□□□□ -1.12
LINC01289-201ENST00000519550 CUL7Q14999 1698 aa8.07□□□□□ -1.12
LINC01289-201ENST00000519550 SLC4A2P04920 1241 aa8.07□□□□□ -1.12
LINC01289-201ENST00000519550 EIF4G3O43432 1585 aaKnown RBP8.06□□□□□ -1.12
LINC01289-201ENST00000519550 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
LINC01289-201ENST00000519550 PODXL2Q9NZ53 605 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms