RNA–Protein interactions for RNA: ENST00000516601.1

RNU5B-3P-201, Transcript of RNA, U5B small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU5B-3P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5B-3P-201ENST00000516601 AEBP2Q6ZN18 517 aaPredicted RBP18.73■□□□□ 0.59
RNU5B-3P-201ENST00000516601 CHIC1Q5VXU3 224 aa17.46■□□□□ 0.39
RNU5B-3P-201ENST00000516601 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
RNU5B-3P-201ENST00000516601 PHF23Q9BUL5 403 aaPredicted RBP15.73■□□□□ 0.11
RNU5B-3P-201ENST00000516601 FOXD1Q16676 465 aa14.94□□□□□ -0.02
RNU5B-3P-201ENST00000516601 POTEDQ86YR6 584 aa14.2□□□□□ -0.14
RNU5B-3P-201ENST00000516601 MSH5O43196 834 aa13.99□□□□□ -0.17
RNU5B-3P-201ENST00000516601 PIAS4Q8N2W9 510 aaPredicted RBP13.89□□□□□ -0.19
RNU5B-3P-201ENST00000516601 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
RNU5B-3P-201ENST00000516601 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
RNU5B-3P-201ENST00000516601 ADRA2BP18089 450 aa13.76□□□□□ -0.21
RNU5B-3P-201ENST00000516601 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
RNU5B-3P-201ENST00000516601 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
RNU5B-3P-201ENST00000516601 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
RNU5B-3P-201ENST00000516601 CACNB1Q02641 598 aaPredicted RBP12.24□□□□□ -0.45
RNU5B-3P-201ENST00000516601 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
RNU5B-3P-201ENST00000516601 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
RNU5B-3P-201ENST00000516601 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
RNU5B-3P-201ENST00000516601 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
RNU5B-3P-201ENST00000516601 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
RNU5B-3P-201ENST00000516601 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
RNU5B-3P-201ENST00000516601 C1QBPQ07021 282 aaKnown RBP11.72□□□□□ -0.53
RNU5B-3P-201ENST00000516601 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
RNU5B-3P-201ENST00000516601 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
RNU5B-3P-201ENST00000516601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.57
RNU5B-3P-201ENST00000516601 NPM3O75607 178 aaKnown RBP11.42□□□□□ -0.58
RNU5B-3P-201ENST00000516601 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
RNU5B-3P-201ENST00000516601 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
RNU5B-3P-201ENST00000516601 CAPN15O75808 1086 aa11.16□□□□□ -0.62
RNU5B-3P-201ENST00000516601 DSG3P32926 999 aa11.12□□□□□ -0.63
RNU5B-3P-201ENST00000516601 POTEHQ6S545 545 aa11.06□□□□□ -0.64
RNU5B-3P-201ENST00000516601 KCNA4P22459 653 aa11□□□□□ -0.65
RNU5B-3P-201ENST00000516601 SLC4A2P04920 1241 aa10.98□□□□□ -0.65
RNU5B-3P-201ENST00000516601 TRHP20396 242 aaPredicted RBP10.94□□□□□ -0.66
RNU5B-3P-201ENST00000516601 ABCB7O75027 752 aa10.93□□□□□ -0.66
RNU5B-3P-201ENST00000516601 ZNF219Q9P2Y4 722 aaPredicted RBP10.8□□□□□ -0.68
RNU5B-3P-201ENST00000516601 APLP2Q06481 763 aa10.76□□□□□ -0.69
RNU5B-3P-201ENST00000516601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.7□□□□□ -0.7
RNU5B-3P-201ENST00000516601 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
RNU5B-3P-201ENST00000516601 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
RNU5B-3P-201ENST00000516601 POLA2Q14181 598 aa10.56□□□□□ -0.72
RNU5B-3P-201ENST00000516601 RBM42Q9BTD8 480 aaKnown RBP10.54□□□□□ -0.72
RNU5B-3P-201ENST00000516601 MYCNP04198 464 aaPredicted RBP10.51□□□□□ -0.73
RNU5B-3P-201ENST00000516601 CHRDL2Q6WN34 429 aa10.49□□□□□ -0.73
RNU5B-3P-201ENST00000516601 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
RNU5B-3P-201ENST00000516601 SLC4A1APQ9BWU0 796 aaKnown RBP10.29□□□□□ -0.76
RNU5B-3P-201ENST00000516601 AKT1S1Q96B36 256 aa10.27□□□□□ -0.77
RNU5B-3P-201ENST00000516601 FOXD4L1Q9NU39 408 aa10.27□□□□□ -0.77
RNU5B-3P-201ENST00000516601 OSCARQ8IYS5 282 aa10.25□□□□□ -0.77
RNU5B-3P-201ENST00000516601 REM2Q8IYK8 340 aaPredicted RBP10.23□□□□□ -0.77
RNU5B-3P-201ENST00000516601 SP7Q8TDD2 431 aaPredicted RBP10.23□□□□□ -0.77
RNU5B-3P-201ENST00000516601 PIP4P2Q8N4L2 257 aa10.21□□□□□ -0.77
RNU5B-3P-201ENST00000516601 ZBTB12Q9Y330 459 aaPredicted RBP10.21□□□□□ -0.77
RNU5B-3P-201ENST00000516601 PITPNM1O00562 1244 aa10.15□□□□□ -0.78
RNU5B-3P-201ENST00000516601 ZBTB22O15209 634 aa10.13□□□□□ -0.79
RNU5B-3P-201ENST00000516601 HAX1O00165 279 aa10.1□□□□□ -0.79
RNU5B-3P-201ENST00000516601 FXR2P51116 673 aaKnown RBP eCLIP10.06□□□□□ -0.8
RNU5B-3P-201ENST00000516601 EVX2Q03828 476 aa10.01□□□□□ -0.81
RNU5B-3P-201ENST00000516601 ATXN8OSP0DMR3 200 aa9.92□□□□□ -0.82
RNU5B-3P-201ENST00000516601 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
RNU5B-3P-201ENST00000516601 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
RNU5B-3P-201ENST00000516601 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
RNU5B-3P-201ENST00000516601 FBLN2P98095 1184 aa9.9□□□□□ -0.82
RNU5B-3P-201ENST00000516601 CLEC11AQ9Y240 323 aa9.89□□□□□ -0.83
RNU5B-3P-201ENST00000516601 PRKAR2AP13861 404 aaKnown RBP9.88□□□□□ -0.83
RNU5B-3P-201ENST00000516601 MKRN4PQ13434 485 aaPredicted RBP9.88□□□□□ -0.83
RNU5B-3P-201ENST00000516601 SPDYE1Q8NFV5 336 aaPredicted RBP9.81□□□□□ -0.84
RNU5B-3P-201ENST00000516601 ZNF692Q9BU19 519 aaPredicted RBP9.8□□□□□ -0.84
RNU5B-3P-201ENST00000516601 CHADLQ6NUI6 762 aa9.77□□□□□ -0.85
RNU5B-3P-201ENST00000516601 SSUH2Q9Y2M2 353 aa9.77□□□□□ -0.85
RNU5B-3P-201ENST00000516601 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
RNU5B-3P-201ENST00000516601 GABBR2O75899 941 aa9.7□□□□□ -0.86
RNU5B-3P-201ENST00000516601 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
RNU5B-3P-201ENST00000516601 PRR29P0C7W0 189 aa9.64□□□□□ -0.87
RNU5B-3P-201ENST00000516601 LHX8Q68G74 356 aa9.61□□□□□ -0.87
RNU5B-3P-201ENST00000516601 POTEIP0CG38 1075 aa9.54□□□□□ -0.88
RNU5B-3P-201ENST00000516601 CD44P16070 742 aaKnown RBP9.54□□□□□ -0.88
RNU5B-3P-201ENST00000516601 FARP1Q9Y4F1 1045 aaPredicted RBP9.52□□□□□ -0.89
RNU5B-3P-201ENST00000516601 CSRNP3Q8WYN3 585 aa9.39□□□□□ -0.91
RNU5B-3P-201ENST00000516601 ZRANB1Q9UGI0 708 aa9.38□□□□□ -0.91
RNU5B-3P-201ENST00000516601 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
RNU5B-3P-201ENST00000516601 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
RNU5B-3P-201ENST00000516601 ZNF579Q8NAF0 562 aaKnown RBP9.34□□□□□ -0.91
RNU5B-3P-201ENST00000516601 GALR2O43603 387 aaPredicted RBP9.32□□□□□ -0.92
RNU5B-3P-201ENST00000516601 CLCN6P51797 869 aa9.3□□□□□ -0.92
RNU5B-3P-201ENST00000516601 PHF12Q96QT6 1004 aa9.27□□□□□ -0.93
RNU5B-3P-201ENST00000516601 PLSCR2Q9NRY7 297 aa9.27□□□□□ -0.93
RNU5B-3P-201ENST00000516601 STAG3Q9UJ98 1225 aa9.25□□□□□ -0.93
RNU5B-3P-201ENST00000516601 SPDYE4A6NLX3 237 aa9.24□□□□□ -0.93
RNU5B-3P-201ENST00000516601 POTEB2H3BUK9 544 aa9.23□□□□□ -0.93
RNU5B-3P-201ENST00000516601 OTUD5Q96G74 571 aa9.21□□□□□ -0.94
RNU5B-3P-201ENST00000516601 PAK3O75914 559 aaPredicted RBP9.18□□□□□ -0.94
RNU5B-3P-201ENST00000516601 PELP1Q8IZL8 1130 aaKnown RBP9.18□□□□□ -0.94
RNU5B-3P-201ENST00000516601 EHMT2Q96KQ7 1210 aa9.18□□□□□ -0.94
RNU5B-3P-201ENST00000516601 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
RNU5B-3P-201ENST00000516601 NPM1P06748 294 aaKnown RBP eCLIP9.12□□□□□ -0.95
RNU5B-3P-201ENST00000516601 MS4A3Q96HJ5 214 aa9.1□□□□□ -0.95
RNU5B-3P-201ENST00000516601 POTEMA6NI47 508 aa9.06□□□□□ -0.96
RNU5B-3P-201ENST00000516601 POTEJP0CG39 1038 aa9.06□□□□□ -0.96
RNU5B-3P-201ENST00000516601 METRNQ9UJH8 293 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms