RNA–Protein interactions for RNA: ENST00000587877.1

LINC01478-201, Transcript of long intergenic non-protein coding RNA 1478, humanhuman

TSL 1 (best) BASIC

Gene LINC01478, Length 2,068 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01478-201ENST00000587877 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
LINC01478-201ENST00000587877 CHIC1Q5VXU3 224 aa14.01□□□□□ -0.17
LINC01478-201ENST00000587877 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
LINC01478-201ENST00000587877 SENP3Q9H4L4 574 aaPredicted RBP12.68□□□□□ -0.38
LINC01478-201ENST00000587877 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.41
LINC01478-201ENST00000587877 FOXD1Q16676 465 aa11.78□□□□□ -0.52
LINC01478-201ENST00000587877 NISCHQ9Y2I1 1504 aa11.68□□□□□ -0.54
LINC01478-201ENST00000587877 MSH5O43196 834 aa11.58□□□□□ -0.56
LINC01478-201ENST00000587877 PLPPR3Q6T4P5 718 aa11.18□□□□□ -0.62
LINC01478-201ENST00000587877 PIAS4Q8N2W9 510 aaPredicted RBP11.01□□□□□ -0.65
LINC01478-201ENST00000587877 PPP6R1Q9UPN7 881 aa10.94□□□□□ -0.66
LINC01478-201ENST00000587877 ADRA2BP18089 450 aa10.9□□□□□ -0.66
LINC01478-201ENST00000587877 CACNB1Q02641 598 aaPredicted RBP10.71□□□□□ -0.69
LINC01478-201ENST00000587877 POTEHQ6S545 545 aa10.37□□□□□ -0.75
LINC01478-201ENST00000587877 SCAF1Q9H7N4 1312 aaKnown RBP10.03□□□□□ -0.8
LINC01478-201ENST00000587877 DMRT2Q9Y5R5 561 aa10.03□□□□□ -0.8
LINC01478-201ENST00000587877 MAPK8IP2Q13387 824 aaPredicted RBP10.02□□□□□ -0.81
LINC01478-201ENST00000587877 ZCCHC6Q5VYS8 1495 aaKnown RBP9.93□□□□□ -0.82
LINC01478-201ENST00000587877 CCDC180Q9P1Z9 1646 aa9.93□□□□□ -0.82
LINC01478-201ENST00000587877 SHROOM4Q9ULL8 1493 aa9.87□□□□□ -0.83
LINC01478-201ENST00000587877 KCNA4P22459 653 aa9.79□□□□□ -0.84
LINC01478-201ENST00000587877 SUPT5HO00267 1087 aaKnown RBP9.77□□□□□ -0.85
LINC01478-201ENST00000587877 PPP4R3CPQ6ZMV5 832 aa9.76□□□□□ -0.85
LINC01478-201ENST00000587877 DCAF1Q9Y4B6 1507 aa9.69□□□□□ -0.86
LINC01478-201ENST00000587877 HRCP23327 699 aa9.64□□□□□ -0.87
LINC01478-201ENST00000587877 HOXD11P31277 338 aaPredicted RBP9.64□□□□□ -0.87
LINC01478-201ENST00000587877 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
LINC01478-201ENST00000587877 MYO15BQ96JP2 1530 aa9.61□□□□□ -0.87
LINC01478-201ENST00000587877 DCAF8L1A6NGE4 600 aa9.59□□□□□ -0.87
LINC01478-201ENST00000587877 RNF39Q9H2S5 420 aa9.58□□□□□ -0.88
LINC01478-201ENST00000587877 RNF216Q9NWF9 866 aaPredicted RBP9.55□□□□□ -0.88
LINC01478-201ENST00000587877 C1QBPQ07021 282 aaKnown RBP9.51□□□□□ -0.89
LINC01478-201ENST00000587877 PCGF6Q9BYE7 350 aa9.44□□□□□ -0.9
LINC01478-201ENST00000587877 NPM3O75607 178 aaKnown RBP9.43□□□□□ -0.9
LINC01478-201ENST00000587877 DCAF8L2P0C7V8 631 aa9.43□□□□□ -0.9
LINC01478-201ENST00000587877 ABCC9O60706 1549 aa9.4□□□□□ -0.91
LINC01478-201ENST00000587877 NCBP3Q53F19 620 aaKnown RBP9.4□□□□□ -0.91
LINC01478-201ENST00000587877 DNAJC5BQ9UF47 199 aa9.35□□□□□ -0.91
LINC01478-201ENST00000587877 TRIM26Q12899 539 aaPredicted RBP9.34□□□□□ -0.91
LINC01478-201ENST00000587877 ZEB1P37275 1124 aaPredicted RBP9.28□□□□□ -0.92
LINC01478-201ENST00000587877 LOC105371045A0A1W2PR82 267 aa9.28□□□□□ -0.92
LINC01478-201ENST00000587877 RSF1Q96T23 1441 aaPredicted RBP9.27□□□□□ -0.92
LINC01478-201ENST00000587877 EHMT2Q96KQ7 1210 aa9.27□□□□□ -0.93
LINC01478-201ENST00000587877 PPARGC1BQ86YN6 1023 aaKnown RBP9.26□□□□□ -0.93
LINC01478-201ENST00000587877 RB1CC1Q8TDY2 1594 aa9.24□□□□□ -0.93
LINC01478-201ENST00000587877 SLC4A1APQ9BWU0 796 aaKnown RBP9.22□□□□□ -0.93
LINC01478-201ENST00000587877 SCRIBQ14160 1630 aa9.18□□□□□ -0.94
LINC01478-201ENST00000587877 TRIM41Q8WV44 630 aa9.17□□□□□ -0.94
LINC01478-201ENST00000587877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.17□□□□□ -0.94
LINC01478-201ENST00000587877 NACADO15069 1562 aa9.14□□□□□ -0.95
LINC01478-201ENST00000587877 PLSCR2Q9NRY7 297 aa9.13□□□□□ -0.95
LINC01478-201ENST00000587877 ZBTB22O15209 634 aa9.1□□□□□ -0.95
LINC01478-201ENST00000587877 PELP1Q8IZL8 1130 aaKnown RBP9.1□□□□□ -0.95
LINC01478-201ENST00000587877 CSRNP3Q8WYN3 585 aa9.09□□□□□ -0.95
LINC01478-201ENST00000587877 SP7Q8TDD2 431 aaPredicted RBP9.07□□□□□ -0.96
LINC01478-201ENST00000587877 MROH2BQ7Z745 1585 aa9.04□□□□□ -0.96
LINC01478-201ENST00000587877 BAZ1AQ9NRL2 1556 aaPredicted RBP9.02□□□□□ -0.96
LINC01478-201ENST00000587877 CECR2Q9BXF3 1484 aa9.02□□□□□ -0.97
LINC01478-201ENST00000587877 EIF4G1Q04637 1599 aaKnown RBP9□□□□□ -0.97
LINC01478-201ENST00000587877 FAM9AQ8IZU1 332 aaPredicted RBP8.98□□□□□ -0.97
LINC01478-201ENST00000587877 U3KPZ7 1027 aaPredicted RBP8.96□□□□□ -0.97
LINC01478-201ENST00000587877 WIZO95785 1651 aa8.96□□□□□ -0.97
LINC01478-201ENST00000587877 WRNQ14191 1432 aaPredicted RBP eCLIP8.96□□□□□ -0.98
LINC01478-201ENST00000587877 TOP2AP11388 1531 aaKnown RBP8.93□□□□□ -0.98
LINC01478-201ENST00000587877 SLC4A2P04920 1241 aa8.93□□□□□ -0.98
LINC01478-201ENST00000587877 EEA1Q15075 1411 aa8.91□□□□□ -0.98
LINC01478-201ENST00000587877 CCER1Q8TC90 406 aaPredicted RBP8.87□□□□□ -0.99
LINC01478-201ENST00000587877 TNIKQ9UKE5 1360 aa8.87□□□□□ -0.99
LINC01478-201ENST00000587877 SMARCA4P51532 1647 aa8.85□□□□□ -0.99
LINC01478-201ENST00000587877 SMARCA2P51531 1590 aa8.84□□□□□ -0.99
LINC01478-201ENST00000587877 CAPN15O75808 1086 aa8.84□□□□□ -0.99
LINC01478-201ENST00000587877 CEP162Q5TB80 1403 aa8.84□□□□□ -0.99
LINC01478-201ENST00000587877 SPINK5Q9NQ38 1064 aaPredicted RBP8.84□□□□□ -0.99
LINC01478-201ENST00000587877 ACIN1Q9UKV3 1341 aaKnown RBP8.83□□□□□ -1
LINC01478-201ENST00000587877 CCDC88BA6NC98 1476 aa8.83□□□□□ -1
LINC01478-201ENST00000587877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.82□□□□□ -1
LINC01478-201ENST00000587877 CENPBP07199 599 aaPredicted RBP8.81□□□□□ -1
LINC01478-201ENST00000587877 DSG3P32926 999 aa8.81□□□□□ -1
LINC01478-201ENST00000587877 FOXD4L1Q9NU39 408 aa8.81□□□□□ -1
LINC01478-201ENST00000587877 ABCC8Q09428 1581 aa8.79□□□□□ -1
LINC01478-201ENST00000587877 GOLGA3Q08378 1498 aa8.79□□□□□ -1
LINC01478-201ENST00000587877 DIEXFQ68CQ4 756 aaKnown RBP8.78□□□□□ -1
LINC01478-201ENST00000587877 SOGA1O94964 1423 aa8.76□□□□□ -1.01
LINC01478-201ENST00000587877 APLP2Q06481 763 aa8.76□□□□□ -1.01
LINC01478-201ENST00000587877 PEG3Q9GZU2 1588 aa8.75□□□□□ -1.01
LINC01478-201ENST00000587877 NEUROD1Q13562 356 aa8.74□□□□□ -1.01
LINC01478-201ENST00000587877 MYT1Q01538 1121 aa8.74□□□□□ -1.01
LINC01478-201ENST00000587877 CEP164Q9UPV0 1460 aa8.73□□□□□ -1.01
LINC01478-201ENST00000587877 KIF21BO75037 1637 aa8.73□□□□□ -1.01
LINC01478-201ENST00000587877 HNRNPUL2Q1KMD3 747 aaKnown RBP8.73□□□□□ -1.01
LINC01478-201ENST00000587877 ZNF316A6NFI3 1004 aaPredicted RBP8.72□□□□□ -1.01
LINC01478-201ENST00000587877 ZNF219Q9P2Y4 722 aaPredicted RBP8.7□□□□□ -1.02
LINC01478-201ENST00000587877 BAZ1BQ9UIG0 1483 aaKnown RBP8.7□□□□□ -1.02
LINC01478-201ENST00000587877 UNC13AQ9UPW8 1703 aa8.69□□□□□ -1.02
LINC01478-201ENST00000587877 UBTFP17480 764 aaKnown RBP8.69□□□□□ -1.02
LINC01478-201ENST00000587877 GTF3C3Q9Y5Q9 886 aa8.68□□□□□ -1.02
LINC01478-201ENST00000587877 RUSC2Q8N2Y8 1516 aa8.68□□□□□ -1.02
LINC01478-201ENST00000587877 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
LINC01478-201ENST00000587877 VPS8Q8N3P4 1428 aa8.66□□□□□ -1.02
LINC01478-201ENST00000587877 SAMD1Q6SPF0 538 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms