RNA–Protein interactions for RNA: ENST00000410306.1

RNU2-43P-201, Transcript of RNA, U2 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU2-43P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-43P-201ENST00000410306 CHIC1Q5VXU3 224 aa13□□□□□ -0.33
RNU2-43P-201ENST00000410306 AEBP2Q6ZN18 517 aaPredicted RBP12.81□□□□□ -0.36
RNU2-43P-201ENST00000410306 PHF23Q9BUL5 403 aaPredicted RBP11.49□□□□□ -0.57
RNU2-43P-201ENST00000410306 SENP3Q9H4L4 574 aaPredicted RBP10.79□□□□□ -0.68
RNU2-43P-201ENST00000410306 PLPPR3Q6T4P5 718 aa10.77□□□□□ -0.69
RNU2-43P-201ENST00000410306 ADRA2BP18089 450 aa10.07□□□□□ -0.8
RNU2-43P-201ENST00000410306 PPP6R1Q9UPN7 881 aa9.96□□□□□ -0.82
RNU2-43P-201ENST00000410306 FOXD1Q16676 465 aa9.95□□□□□ -0.82
RNU2-43P-201ENST00000410306 KCNA4P22459 653 aa9.91□□□□□ -0.82
RNU2-43P-201ENST00000410306 EHMT2Q96KQ7 1210 aa9.82□□□□□ -0.84
RNU2-43P-201ENST00000410306 POTEDQ86YR6 584 aa9.72□□□□□ -0.85
RNU2-43P-201ENST00000410306 PPP4R3CPQ6ZMV5 832 aa9.55□□□□□ -0.88
RNU2-43P-201ENST00000410306 PIAS4Q8N2W9 510 aaPredicted RBP9.52□□□□□ -0.89
RNU2-43P-201ENST00000410306 SLC4A1APQ9BWU0 796 aaKnown RBP9.52□□□□□ -0.89
RNU2-43P-201ENST00000410306 CSRNP3Q8WYN3 585 aa9.47□□□□□ -0.89
RNU2-43P-201ENST00000410306 NCBP3Q53F19 620 aaKnown RBP9.44□□□□□ -0.9
RNU2-43P-201ENST00000410306 NPM3O75607 178 aaKnown RBP9.31□□□□□ -0.92
RNU2-43P-201ENST00000410306 CNKSR2Q8WXI2 1034 aa9.18□□□□□ -0.94
RNU2-43P-201ENST00000410306 ZBTB22O15209 634 aa9.13□□□□□ -0.95
RNU2-43P-201ENST00000410306 SCAF1Q9H7N4 1312 aaKnown RBP9.12□□□□□ -0.95
RNU2-43P-201ENST00000410306 MSH5O43196 834 aa8.98□□□□□ -0.97
RNU2-43P-201ENST00000410306 DNAJC5BQ9UF47 199 aa8.98□□□□□ -0.97
RNU2-43P-201ENST00000410306 FOXD4L1Q9NU39 408 aa8.97□□□□□ -0.97
RNU2-43P-201ENST00000410306 MAPK8IP2Q13387 824 aaPredicted RBP8.9□□□□□ -0.98
RNU2-43P-201ENST00000410306 RNF216Q9NWF9 866 aaPredicted RBP8.88□□□□□ -0.99
RNU2-43P-201ENST00000410306 HOXD11P31277 338 aaPredicted RBP8.71□□□□□ -1.02
RNU2-43P-201ENST00000410306 DMRT2Q9Y5R5 561 aa8.7□□□□□ -1.02
RNU2-43P-201ENST00000410306 SLC4A2P04920 1241 aa8.67□□□□□ -1.02
RNU2-43P-201ENST00000410306 AMER1Q5JTC6 1135 aaPredicted RBP8.66□□□□□ -1.02
RNU2-43P-201ENST00000410306 RTN4Q9NQC3 1192 aaKnown RBP8.65□□□□□ -1.02
RNU2-43P-201ENST00000410306 SLC24A1O60721 1099 aa8.63□□□□□ -1.03
RNU2-43P-201ENST00000410306 ATXN8OSP0DMR3 200 aa8.62□□□□□ -1.03
RNU2-43P-201ENST00000410306 MYCNP04198 464 aaPredicted RBP8.61□□□□□ -1.03
RNU2-43P-201ENST00000410306 FKBP8Q14318 412 aa8.53□□□□□ -1.04
RNU2-43P-201ENST00000410306 ATF5Q9Y2D1 282 aaPredicted RBP8.33□□□□□ -1.08
RNU2-43P-201ENST00000410306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.29□□□□□ -1.08
RNU2-43P-201ENST00000410306 HNRNPUL2Q1KMD3 747 aaKnown RBP8.29□□□□□ -1.08
RNU2-43P-201ENST00000410306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.29□□□□□ -1.08
RNU2-43P-201ENST00000410306 DCAF8L1A6NGE4 600 aa8.28□□□□□ -1.08
RNU2-43P-201ENST00000410306 SAMD1Q6SPF0 538 aaPredicted RBP8.28□□□□□ -1.08
RNU2-43P-201ENST00000410306 U3KPZ7 1027 aaPredicted RBP8.23□□□□□ -1.09
RNU2-43P-201ENST00000410306 ZNF219Q9P2Y4 722 aaPredicted RBP8.13□□□□□ -1.11
RNU2-43P-201ENST00000410306 FBXO3Q9UK99 471 aa8.09□□□□□ -1.11
RNU2-43P-201ENST00000410306 APLP2Q06481 763 aa8.08□□□□□ -1.12
RNU2-43P-201ENST00000410306 SPDYE4A6NLX3 237 aa8.05□□□□□ -1.12
RNU2-43P-201ENST00000410306 PROM2Q8N271 834 aa8.01□□□□□ -1.13
RNU2-43P-201ENST00000410306 MKRN4PQ13434 485 aaPredicted RBP8□□□□□ -1.13
RNU2-43P-201ENST00000410306 VASPP50552 380 aaPredicted RBP7.98□□□□□ -1.13
RNU2-43P-201ENST00000410306 PLCB2Q00722 1185 aa7.97□□□□□ -1.13
RNU2-43P-201ENST00000410306 FBLN2P98095 1184 aa7.94□□□□□ -1.14
RNU2-43P-201ENST00000410306 IFNLR1Q8IU57 520 aaPredicted RBP7.9□□□□□ -1.14
RNU2-43P-201ENST00000410306 DCAF8L2P0C7V8 631 aa7.86□□□□□ -1.15
RNU2-43P-201ENST00000410306 TRHP20396 242 aaPredicted RBP7.86□□□□□ -1.15
RNU2-43P-201ENST00000410306 HAP1P54257 671 aaPredicted RBP7.85□□□□□ -1.15
RNU2-43P-201ENST00000410306 POLA2Q14181 598 aa7.85□□□□□ -1.15
RNU2-43P-201ENST00000410306 SPINK5Q9NQ38 1064 aaPredicted RBP7.85□□□□□ -1.15
RNU2-43P-201ENST00000410306 PKD2Q13563 968 aa7.83□□□□□ -1.16
RNU2-43P-201ENST00000410306 CACNB1Q02641 598 aaPredicted RBP7.8□□□□□ -1.16
RNU2-43P-201ENST00000410306 CAPN15O75808 1086 aa7.78□□□□□ -1.16
RNU2-43P-201ENST00000410306 ZBTB12Q9Y330 459 aaPredicted RBP7.77□□□□□ -1.17
RNU2-43P-201ENST00000410306 BCANQ96GW7 911 aa7.76□□□□□ -1.17
RNU2-43P-201ENST00000410306 RNF39Q9H2S5 420 aa7.75□□□□□ -1.17
RNU2-43P-201ENST00000410306 VSIG10Q8N0Z9 540 aa7.74□□□□□ -1.17
RNU2-43P-201ENST00000410306 SPOCK2Q92563 424 aa7.72□□□□□ -1.17
RNU2-43P-201ENST00000410306 KLHL34Q8N239 644 aa7.7□□□□□ -1.18
RNU2-43P-201ENST00000410306 ECM2O94769 699 aaPredicted RBP7.69□□□□□ -1.18
RNU2-43P-201ENST00000410306 BBXQ8WY36 941 aaPredicted RBP7.69□□□□□ -1.18
RNU2-43P-201ENST00000410306 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.69□□□□□ -1.18
RNU2-43P-201ENST00000410306 ABCB7O75027 752 aa7.68□□□□□ -1.18
RNU2-43P-201ENST00000410306 C1QBPQ07021 282 aaKnown RBP7.68□□□□□ -1.18
RNU2-43P-201ENST00000410306 STAG3Q9UJ98 1225 aa7.66□□□□□ -1.18
RNU2-43P-201ENST00000410306 TAOK2Q9UL54 1235 aa7.65□□□□□ -1.18
RNU2-43P-201ENST00000410306 NPM1P06748 294 aaKnown RBP eCLIP7.64□□□□□ -1.19
RNU2-43P-201ENST00000410306 PRKCSHP14314 528 aaPredicted RBP7.63□□□□□ -1.19
RNU2-43P-201ENST00000410306 PAXIP1Q6ZW49 1069 aaPredicted RBP7.63□□□□□ -1.19
RNU2-43P-201ENST00000410306 ZNF692Q9BU19 519 aaPredicted RBP7.63□□□□□ -1.19
RNU2-43P-201ENST00000410306 KDM2AQ9Y2K7 1162 aa7.63□□□□□ -1.19
RNU2-43P-201ENST00000410306 PLCD3Q8N3E9 789 aa7.62□□□□□ -1.19
RNU2-43P-201ENST00000410306 SPDYE2BA6NHP3 402 aa7.6□□□□□ -1.19
RNU2-43P-201ENST00000410306 RGL2O15211 777 aa7.6□□□□□ -1.19
RNU2-43P-201ENST00000410306 SPDYE6P0CI01 402 aa7.6□□□□□ -1.19
RNU2-43P-201ENST00000410306 SPDYE2Q495Y8 402 aa7.6□□□□□ -1.19
RNU2-43P-201ENST00000410306 CFAP44Q96MT7 982 aa7.6□□□□□ -1.19
RNU2-43P-201ENST00000410306 SSUH2Q9Y2M2 353 aa7.6□□□□□ -1.19
RNU2-43P-201ENST00000410306 OSCARQ8IYS5 282 aa7.58□□□□□ -1.2
RNU2-43P-201ENST00000410306 PABPN1Q86U42 306 aaKnown RBP eCLIP7.56□□□□□ -1.2
RNU2-43P-201ENST00000410306 MIER1Q8N108 512 aa7.56□□□□□ -1.2
RNU2-43P-201ENST00000410306 SPRYD3Q8NCJ5 442 aa7.55□□□□□ -1.2
RNU2-43P-201ENST00000410306 DSG3P32926 999 aa7.54□□□□□ -1.2
RNU2-43P-201ENST00000410306 TPRNQ4KMQ1 711 aa7.53□□□□□ -1.2
RNU2-43P-201ENST00000410306 TSHZ2Q9NRE2 1034 aa7.51□□□□□ -1.21
RNU2-43P-201ENST00000410306 ZBTB47Q9UFB7 747 aaPredicted RBP7.51□□□□□ -1.21
RNU2-43P-201ENST00000410306 CHGAP10645 457 aaKnown RBP7.5□□□□□ -1.21
RNU2-43P-201ENST00000410306 CIZ1Q9ULV3 898 aaPredicted RBP7.5□□□□□ -1.21
RNU2-43P-201ENST00000410306 PLEKHG5O94827 1062 aa7.49□□□□□ -1.21
RNU2-43P-201ENST00000410306 TRIM41Q8WV44 630 aa7.47□□□□□ -1.21
RNU2-43P-201ENST00000410306 POTEHQ6S545 545 aa7.45□□□□□ -1.22
RNU2-43P-201ENST00000410306 HS6ST3Q8IZP7 471 aa7.45□□□□□ -1.22
RNU2-43P-201ENST00000410306 DNAJC5Q9H3Z4 198 aa7.44□□□□□ -1.22
RNU2-43P-201ENST00000410306 NBR1Q14596 966 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 296.5 ms