RNA–Protein interactions for RNA: ENST00000553993.1

TRAV32-201, Transcript of T cell receptor alpha variable 32 (pseudogene), humanhuman

BASIC

Gene TRAV32, Length 340 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV32-201ENST00000553993 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
TRAV32-201ENST00000553993 CHIC1Q5VXU3 224 aa14.82□□□□□ -0.04
TRAV32-201ENST00000553993 SENP3Q9H4L4 574 aaPredicted RBP13.24□□□□□ -0.29
TRAV32-201ENST00000553993 PHF23Q9BUL5 403 aaPredicted RBP12.99□□□□□ -0.33
TRAV32-201ENST00000553993 FOXD1Q16676 465 aa12.26□□□□□ -0.45
TRAV32-201ENST00000553993 PLPPR3Q6T4P5 718 aa12.04□□□□□ -0.48
TRAV32-201ENST00000553993 MSH5O43196 834 aa11.63□□□□□ -0.55
TRAV32-201ENST00000553993 ADRA2BP18089 450 aa11.5□□□□□ -0.57
TRAV32-201ENST00000553993 PPP6R1Q9UPN7 881 aa11.48□□□□□ -0.57
TRAV32-201ENST00000553993 PIAS4Q8N2W9 510 aaPredicted RBP11.44□□□□□ -0.58
TRAV32-201ENST00000553993 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
TRAV32-201ENST00000553993 PPP4R3CPQ6ZMV5 832 aa10.59□□□□□ -0.71
TRAV32-201ENST00000553993 SCAF1Q9H7N4 1312 aaKnown RBP10.57□□□□□ -0.72
TRAV32-201ENST00000553993 DMRT2Q9Y5R5 561 aa10.47□□□□□ -0.73
TRAV32-201ENST00000553993 MAPK8IP2Q13387 824 aaPredicted RBP10.43□□□□□ -0.74
TRAV32-201ENST00000553993 NCBP3Q53F19 620 aaKnown RBP10.34□□□□□ -0.75
TRAV32-201ENST00000553993 CNKSR2Q8WXI2 1034 aa10.31□□□□□ -0.76
TRAV32-201ENST00000553993 KCNA4P22459 653 aa10.29□□□□□ -0.76
TRAV32-201ENST00000553993 NPM3O75607 178 aaKnown RBP10.14□□□□□ -0.79
TRAV32-201ENST00000553993 RNF216Q9NWF9 866 aaPredicted RBP10.11□□□□□ -0.79
TRAV32-201ENST00000553993 HOXD11P31277 338 aaPredicted RBP10.07□□□□□ -0.8
TRAV32-201ENST00000553993 CACNB1Q02641 598 aaPredicted RBP9.96□□□□□ -0.82
TRAV32-201ENST00000553993 DCAF8L1A6NGE4 600 aa9.93□□□□□ -0.82
TRAV32-201ENST00000553993 DNAJC5BQ9UF47 199 aa9.88□□□□□ -0.83
TRAV32-201ENST00000553993 RNF39Q9H2S5 420 aa9.86□□□□□ -0.83
TRAV32-201ENST00000553993 SLC4A1APQ9BWU0 796 aaKnown RBP9.82□□□□□ -0.84
TRAV32-201ENST00000553993 C1QBPQ07021 282 aaKnown RBP9.78□□□□□ -0.84
TRAV32-201ENST00000553993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRAV32-201ENST00000553993 SLC4A2P04920 1241 aa9.57□□□□□ -0.88
TRAV32-201ENST00000553993 FOXD4L1Q9NU39 408 aa9.5□□□□□ -0.89
TRAV32-201ENST00000553993 EHMT2Q96KQ7 1210 aa9.49□□□□□ -0.89
TRAV32-201ENST00000553993 ZBTB22O15209 634 aa9.44□□□□□ -0.9
TRAV32-201ENST00000553993 U3KPZ7 1027 aaPredicted RBP9.44□□□□□ -0.9
TRAV32-201ENST00000553993 MYCNP04198 464 aaPredicted RBP9.4□□□□□ -0.9
TRAV32-201ENST00000553993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.36□□□□□ -0.91
TRAV32-201ENST00000553993 HNRNPUL2Q1KMD3 747 aaKnown RBP9.36□□□□□ -0.91
TRAV32-201ENST00000553993 CSRNP3Q8WYN3 585 aa9.36□□□□□ -0.91
TRAV32-201ENST00000553993 SAMD1Q6SPF0 538 aaPredicted RBP9.31□□□□□ -0.92
TRAV32-201ENST00000553993 APLP2Q06481 763 aa9.29□□□□□ -0.92
TRAV32-201ENST00000553993 CAPN15O75808 1086 aa9.2□□□□□ -0.94
TRAV32-201ENST00000553993 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
TRAV32-201ENST00000553993 DSG3P32926 999 aa9.18□□□□□ -0.94
TRAV32-201ENST00000553993 ATXN8OSP0DMR3 200 aa9.16□□□□□ -0.94
TRAV32-201ENST00000553993 ZNF219Q9P2Y4 722 aaPredicted RBP9.15□□□□□ -0.94
TRAV32-201ENST00000553993 TRHP20396 242 aaPredicted RBP9.14□□□□□ -0.95
TRAV32-201ENST00000553993 ATF5Q9Y2D1 282 aaPredicted RBP9.1□□□□□ -0.95
TRAV32-201ENST00000553993 ABCB7O75027 752 aa9.01□□□□□ -0.97
TRAV32-201ENST00000553993 POLA2Q14181 598 aa8.96□□□□□ -0.98
TRAV32-201ENST00000553993 POTEHQ6S545 545 aa8.95□□□□□ -0.98
TRAV32-201ENST00000553993 RBM42Q9BTD8 480 aaKnown RBP8.86□□□□□ -0.99
TRAV32-201ENST00000553993 ZBTB12Q9Y330 459 aaPredicted RBP8.85□□□□□ -0.99
TRAV32-201ENST00000553993 FBLN2P98095 1184 aa8.8□□□□□ -1
TRAV32-201ENST00000553993 MKRN4PQ13434 485 aaPredicted RBP8.71□□□□□ -1.02
TRAV32-201ENST00000553993 OSCARQ8IYS5 282 aa8.67□□□□□ -1.02
TRAV32-201ENST00000553993 CHRDL2Q6WN34 429 aa8.62□□□□□ -1.03
TRAV32-201ENST00000553993 AKT1S1Q96B36 256 aa8.6□□□□□ -1.03
TRAV32-201ENST00000553993 SPDYE2BA6NHP3 402 aa8.59□□□□□ -1.03
TRAV32-201ENST00000553993 SPDYE6P0CI01 402 aa8.59□□□□□ -1.03
TRAV32-201ENST00000553993 SPDYE2Q495Y8 402 aa8.59□□□□□ -1.03
TRAV32-201ENST00000553993 ZNF692Q9BU19 519 aaPredicted RBP8.55□□□□□ -1.04
TRAV32-201ENST00000553993 SPDYE4A6NLX3 237 aa8.53□□□□□ -1.04
TRAV32-201ENST00000553993 FKBP8Q14318 412 aa8.5□□□□□ -1.05
TRAV32-201ENST00000553993 SSUH2Q9Y2M2 353 aa8.49□□□□□ -1.05
TRAV32-201ENST00000553993 REM2Q8IYK8 340 aaPredicted RBP8.46□□□□□ -1.06
TRAV32-201ENST00000553993 PABPN1Q86U42 306 aaKnown RBP eCLIP8.43□□□□□ -1.06
TRAV32-201ENST00000553993 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
TRAV32-201ENST00000553993 SPDYE1Q8NFV5 336 aaPredicted RBP8.36□□□□□ -1.07
TRAV32-201ENST00000553993 FXR2P51116 673 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRAV32-201ENST00000553993 SP7Q8TDD2 431 aaPredicted RBP8.35□□□□□ -1.07
TRAV32-201ENST00000553993 PITPNM1O00562 1244 aa8.34□□□□□ -1.07
TRAV32-201ENST00000553993 PROM2Q8N271 834 aa8.34□□□□□ -1.07
TRAV32-201ENST00000553993 CLEC11AQ9Y240 323 aa8.32□□□□□ -1.08
TRAV32-201ENST00000553993 STAG3Q9UJ98 1225 aa8.3□□□□□ -1.08
TRAV32-201ENST00000553993 HAX1O00165 279 aa8.24□□□□□ -1.09
TRAV32-201ENST00000553993 PRR29P0C7W0 189 aa8.24□□□□□ -1.09
TRAV32-201ENST00000553993 FBXO3Q9UK99 471 aa8.24□□□□□ -1.09
TRAV32-201ENST00000553993 PRKAR2AP13861 404 aaKnown RBP8.13□□□□□ -1.11
TRAV32-201ENST00000553993 PLEKHG5O94827 1062 aa8.12□□□□□ -1.11
TRAV32-201ENST00000553993 MIER1Q8N108 512 aa8.11□□□□□ -1.11
TRAV32-201ENST00000553993 PLCD3Q8N3E9 789 aa8.11□□□□□ -1.11
TRAV32-201ENST00000553993 VASPP50552 380 aaPredicted RBP8.1□□□□□ -1.11
TRAV32-201ENST00000553993 CHADLQ6NUI6 762 aa8.1□□□□□ -1.11
TRAV32-201ENST00000553993 CREBZFQ9NS37 354 aa8.09□□□□□ -1.11
TRAV32-201ENST00000553993 C19orf67A6NJJ6 358 aa8.08□□□□□ -1.12
TRAV32-201ENST00000553993 EVX2Q03828 476 aa8.07□□□□□ -1.12
TRAV32-201ENST00000553993 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
TRAV32-201ENST00000553993 FARP1Q9Y4F1 1045 aaPredicted RBP8.02□□□□□ -1.13
TRAV32-201ENST00000553993 NPM1P06748 294 aaKnown RBP eCLIP8□□□□□ -1.13
TRAV32-201ENST00000553993 CLCN6P51797 869 aa8□□□□□ -1.13
TRAV32-201ENST00000553993 KLHL34Q8N239 644 aa8□□□□□ -1.13
TRAV32-201ENST00000553993 MNX1P50219 401 aaPredicted RBP7.98□□□□□ -1.13
TRAV32-201ENST00000553993 GABBR2O75899 941 aa7.96□□□□□ -1.14
TRAV32-201ENST00000553993 IFNLR1Q8IU57 520 aaPredicted RBP7.95□□□□□ -1.14
TRAV32-201ENST00000553993 SPOCK2Q92563 424 aa7.91□□□□□ -1.14
TRAV32-201ENST00000553993 PAK3O75914 559 aaPredicted RBP7.89□□□□□ -1.15
TRAV32-201ENST00000553993 CD44P16070 742 aaKnown RBP7.89□□□□□ -1.15
TRAV32-201ENST00000553993 NUBP1P53384 320 aa7.87□□□□□ -1.15
TRAV32-201ENST00000553993 RASEFQ8IZ41 740 aa7.86□□□□□ -1.15
TRAV32-201ENST00000553993 FAM212AQ96EL1 285 aa7.86□□□□□ -1.15
TRAV32-201ENST00000553993 TSPYL2Q9H2G4 693 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms