Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 AC008550.1-201ENST00000511500 884 ntBASIC19.23■□□□□ 0.67
PKP3Q9Y446 CD177P1-201ENST00000606252 935 ntBASIC19.23■□□□□ 0.67
PKP3Q9Y446 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP3Q9Y446 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PKP3Q9Y446 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PKP3Q9Y446 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.22■□□□□ 0.67
PKP3Q9Y446 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.22■□□□□ 0.67
PKP3Q9Y446 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.22■□□□□ 0.67
PKP3Q9Y446 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.22■□□□□ 0.67
PKP3Q9Y446 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 AC026271.3-201ENST00000571884 352 ntBASIC19.22■□□□□ 0.67
PKP3Q9Y446 AL049637.2-201ENST00000641778 930 ntBASIC19.22■□□□□ 0.67
PKP3Q9Y446 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.22■□□□□ 0.67
PKP3Q9Y446 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PKP3Q9Y446 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKP3Q9Y446 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.22■□□□□ 0.67
PKP3Q9Y446 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.22■□□□□ 0.67
PKP3Q9Y446 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP3Q9Y446 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP3Q9Y446 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP3Q9Y446 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PKP3Q9Y446 Z85996.1-201ENST00000494644 937 ntBASIC19.21■□□□□ 0.67
PKP3Q9Y446 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP3Q9Y446 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PKP3Q9Y446 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PKP3Q9Y446 AC141586.3-201ENST00000562166 1838 ntBASIC19.21■□□□□ 0.67
PKP3Q9Y446 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PKP3Q9Y446 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 TEX21P-204ENST00000641479 1693 ntBASIC19.2■□□□□ 0.66
PKP3Q9Y446 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 Z99916.2-201ENST00000604037 246 ntBASIC19.2■□□□□ 0.66
PKP3Q9Y446 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PKP3Q9Y446 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP3Q9Y446 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms