Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.34□□□□□ -0.27
UBE2D4Q9Y2X8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
UBE2D4Q9Y2X8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
UBE2D4Q9Y2X8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.33□□□□□ -0.28
UBE2D4Q9Y2X8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 AC006015.1-201ENST00000429970 570 ntBASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 AC073210.2-201ENST00000430369 194 ntBASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 NOC2LP1-202ENST00000452600 2235 ntBASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
UBE2D4Q9Y2X8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 FEM1AP3-201ENST00000403722 1741 ntBASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms