Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 MYCNOS-205ENST00000641950 531 ntBASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCL1Q9Y2P8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 MFSD11-216ENST00000590393 1141 ntBASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 AC018553.1-201ENST00000616682 1458 ntBASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCL1Q9Y2P8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RCL1Q9Y2P8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 MCRIP2P1-201ENST00000394346 511 ntBASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 AL162412.1-201ENST00000567129 965 ntBASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RCL1Q9Y2P8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.63■□□□□ 0.09
RCL1Q9Y2P8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.63■□□□□ 0.09
RCL1Q9Y2P8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.63■□□□□ 0.09
RCL1Q9Y2P8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCL1Q9Y2P8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms