Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 AC141586.3-201ENST00000562166 1838 ntBASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 AP002982.1-201ENST00000492365 877 ntBASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 AL353708.3-201ENST00000610272 989 ntBASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 TMEM191A-211ENST00000637163 1067 ntBASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 TEX21P-204ENST00000641479 1693 ntBASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 AL161938.1-201ENST00000569833 2180 ntBASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 NIFKP9-201ENST00000419265 221 ntBASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 UBE2SP1-201ENST00000450587 669 ntBASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 SDHAP1-207ENST00000440850 2000 ntBASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA9Q9UGM1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
CHRNA9Q9UGM1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 AL160286.2-201ENST00000567150 934 ntBASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 AL445675.2-201ENST00000620291 557 ntBASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 AL135905.2-201ENST00000584934 1404 ntBASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA9Q9UGM1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA9Q9UGM1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms