Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 RCN1P1-201ENST00000400413 996 ntBASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 TSPY7P-201ENST00000431358 1114 ntBASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 AC012306.2-201ENST00000609350 630 ntBASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 TEX21P-204ENST00000641479 1693 ntBASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 AL031985.4-201ENST00000642138 673 ntBASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 KRT8P41-201ENST00000533985 1514 ntBASIC18.52■□□□□ 0.56
CUEDC1Q9NWM3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.52■□□□□ 0.55
CUEDC1Q9NWM3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CUEDC1Q9NWM3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.52■□□□□ 0.55
CUEDC1Q9NWM3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 RCC2P6-201ENST00000526625 1557 ntBASIC18.51■□□□□ 0.55
CUEDC1Q9NWM3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 AC138932.1-201ENST00000534164 6830 ntBASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 AC011506.1-201ENST00000474329 610 ntBASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.5■□□□□ 0.55
CUEDC1Q9NWM3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms