Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 BX276092.2-201ENST00000417668 665 ntBASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 AC093787.1-201ENST00000450396 207 ntBASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 AL591742.1-201ENST00000604433 565 ntBASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.21■□□□□ 0.5
CCM2LQ9NUG4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 AC097658.1-201ENST00000475555 843 ntBASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 AC016405.3-201ENST00000607710 860 ntBASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 AC083880.1-201ENST00000608266 535 ntBASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2LQ9NUG4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 AC128676.1-201ENST00000454392 318 ntBASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 AC069236.1-201ENST00000604339 616 ntBASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CCM2LQ9NUG4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 UNC93B4-201ENST00000505679 747 ntBASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms