Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 H19-201ENST00000411754 1788 ntTSL 5 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 AC134043.2-201ENST00000624206 2238 ntBASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
CDC42SE1Q9NRR8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 AC090877.2-201ENST00000558441 1738 ntBASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CDC42SE1Q9NRR8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms