Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SSU72Q9NP77 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SSU72Q9NP77 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SSU72Q9NP77 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.01■□□□□ 0.63
SSU72Q9NP77 AP006587.1-201ENST00000534129 1502 ntBASIC19.01■□□□□ 0.63
SSU72Q9NP77 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SSU72Q9NP77 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 AC007322.1-201ENST00000426983 750 ntBASIC19.01■□□□□ 0.63
SSU72Q9NP77 AC093787.1-201ENST00000450396 207 ntBASIC19.01■□□□□ 0.63
SSU72Q9NP77 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.01■□□□□ 0.63
SSU72Q9NP77 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.01■□□□□ 0.63
SSU72Q9NP77 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.01■□□□□ 0.63
SSU72Q9NP77 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.01■□□□□ 0.63
SSU72Q9NP77 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
SSU72Q9NP77 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.01■□□□□ 0.63
SSU72Q9NP77 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.01■□□□□ 0.63
SSU72Q9NP77 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSU72Q9NP77 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19■□□□□ 0.63
SSU72Q9NP77 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SSU72Q9NP77 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19■□□□□ 0.63
SSU72Q9NP77 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 RER1-204ENST00000378518 522 ntTSL 3 BASIC19■□□□□ 0.63
SSU72Q9NP77 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19■□□□□ 0.63
SSU72Q9NP77 ZNRF2P3-201ENST00000424200 374 ntBASIC19■□□□□ 0.63
SSU72Q9NP77 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19■□□□□ 0.63
SSU72Q9NP77 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19■□□□□ 0.63
SSU72Q9NP77 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19■□□□□ 0.63
SSU72Q9NP77 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19■□□□□ 0.63
SSU72Q9NP77 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SSU72Q9NP77 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19■□□□□ 0.63
SSU72Q9NP77 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSU72Q9NP77 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SSU72Q9NP77 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SSU72Q9NP77 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SSU72Q9NP77 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SSU72Q9NP77 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.99■□□□□ 0.63
SSU72Q9NP77 AC006015.1-201ENST00000429970 570 ntBASIC18.99■□□□□ 0.63
SSU72Q9NP77 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.99■□□□□ 0.63
SSU72Q9NP77 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SSU72Q9NP77 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSU72Q9NP77 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSU72Q9NP77 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSU72Q9NP77 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSU72Q9NP77 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSU72Q9NP77 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSU72Q9NP77 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSU72Q9NP77 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSU72Q9NP77 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 AC008764.6-201ENST00000595909 2069 ntBASIC18.98■□□□□ 0.63
SSU72Q9NP77 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 AC016769.1-201ENST00000409132 1010 ntBASIC18.98■□□□□ 0.63
SSU72Q9NP77 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSU72Q9NP77 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSU72Q9NP77 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSU72Q9NP77 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.98■□□□□ 0.63
SSU72Q9NP77 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms