Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC093484.2-201ENST00000580996 2166 ntBASIC19.75■□□□□ 0.75
RPRD1AQ96P16 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 KRT8P11-201ENST00000409686 1436 ntBASIC19.75■□□□□ 0.75
RPRD1AQ96P16 KRT8P9-201ENST00000558927 1449 ntBASIC19.75■□□□□ 0.75
RPRD1AQ96P16 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 AC096733.2-201ENST00000609937 1394 ntBASIC19.74■□□□□ 0.75
RPRD1AQ96P16 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPRD1AQ96P16 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 TSPY21P-201ENST00000433481 731 ntBASIC19.73■□□□□ 0.75
RPRD1AQ96P16 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.73■□□□□ 0.75
RPRD1AQ96P16 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 TSPY23P-201ENST00000440136 739 ntBASIC19.72■□□□□ 0.75
RPRD1AQ96P16 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 PRSS44-201ENST00000515154 1146 ntBASIC19.72■□□□□ 0.75
RPRD1AQ96P16 CKBP1-201ENST00000565489 1086 ntBASIC19.72■□□□□ 0.75
RPRD1AQ96P16 AC133561.5-201ENST00000635547 218 ntBASIC19.72■□□□□ 0.75
RPRD1AQ96P16 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.72■□□□□ 0.75
RPRD1AQ96P16 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPRD1AQ96P16 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPRD1AQ96P16 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPRD1AQ96P16 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RPRD1AQ96P16 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPRD1AQ96P16 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms