Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 AL136038.3-201ENST00000561909 1096 ntBASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 CKBP1-201ENST00000565489 1086 ntBASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 AC069148.1-201ENST00000608741 768 ntBASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 KRT18P38-201ENST00000449496 1282 ntBASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC46A1Q96NT5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 CLEC4GP1-201ENST00000596555 870 ntBASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC46A1Q96NT5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 AC073130.3-201ENST00000624389 2278 ntBASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 AP000523.1-201ENST00000398242 1049 ntBASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 VENTXP5-201ENST00000523979 775 ntBASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC46A1Q96NT5 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms