Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH3Q96II8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH3Q96II8 AC018553.1-201ENST00000616682 1458 ntBASIC20.75■□□□□ 0.91
LRCH3Q96II8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH3Q96II8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH3Q96II8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH3Q96II8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
LRCH3Q96II8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH3Q96II8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH3Q96II8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH3Q96II8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.74■□□□□ 0.91
LRCH3Q96II8 AC244107.1-201ENST00000442033 332 ntBASIC20.74■□□□□ 0.91
LRCH3Q96II8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.74■□□□□ 0.91
LRCH3Q96II8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.74■□□□□ 0.91
LRCH3Q96II8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.74■□□□□ 0.91
LRCH3Q96II8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH3Q96II8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH3Q96II8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH3Q96II8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH3Q96II8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH3Q96II8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LRCH3Q96II8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.73■□□□□ 0.91
LRCH3Q96II8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH3Q96II8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.73■□□□□ 0.91
LRCH3Q96II8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.73■□□□□ 0.91
LRCH3Q96II8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH3Q96II8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH3Q96II8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.73■□□□□ 0.91
LRCH3Q96II8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.73■□□□□ 0.91
LRCH3Q96II8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.73■□□□□ 0.91
LRCH3Q96II8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
LRCH3Q96II8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH3Q96II8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH3Q96II8 AC244015.2-201ENST00000616358 1861 ntBASIC20.73■□□□□ 0.91
LRCH3Q96II8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH3Q96II8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRCH3Q96II8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRCH3Q96II8 TSPY22P-201ENST00000427496 604 ntBASIC20.72■□□□□ 0.91
LRCH3Q96II8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRCH3Q96II8 AC064862.7-201ENST00000604520 867 ntBASIC20.72■□□□□ 0.91
LRCH3Q96II8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRCH3Q96II8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.72■□□□□ 0.91
LRCH3Q96II8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.72■□□□□ 0.91
LRCH3Q96II8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.72■□□□□ 0.91
LRCH3Q96II8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRCH3Q96II8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.72■□□□□ 0.91
LRCH3Q96II8 AF106564.1-201ENST00000607058 2553 ntBASIC20.72■□□□□ 0.91
LRCH3Q96II8 AC093525.10-201ENST00000625130 1569 ntBASIC20.72■□□□□ 0.91
LRCH3Q96II8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LRCH3Q96II8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.71■□□□□ 0.91
LRCH3Q96II8 AC034232.1-201ENST00000506026 1064 ntBASIC20.71■□□□□ 0.91
LRCH3Q96II8 MIR3197-201ENST00000582241 73 ntBASIC20.71■□□□□ 0.91
LRCH3Q96II8 AL773604.1-201ENST00000617417 272 ntBASIC20.71■□□□□ 0.91
LRCH3Q96II8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.71■□□□□ 0.91
LRCH3Q96II8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH3Q96II8 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.71■□□□□ 0.91
LRCH3Q96II8 AC073130.3-201ENST00000624389 2278 ntBASIC20.71■□□□□ 0.91
LRCH3Q96II8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LRCH3Q96II8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
LRCH3Q96II8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.7■□□□□ 0.9
LRCH3Q96II8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
LRCH3Q96II8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LRCH3Q96II8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.7■□□□□ 0.9
LRCH3Q96II8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.7■□□□□ 0.9
LRCH3Q96II8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.7■□□□□ 0.9
LRCH3Q96II8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.7■□□□□ 0.9
LRCH3Q96II8 AC104819.1-201ENST00000504587 486 ntBASIC20.7■□□□□ 0.9
LRCH3Q96II8 RNPS1P1-201ENST00000507437 918 ntBASIC20.7■□□□□ 0.9
LRCH3Q96II8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.7■□□□□ 0.9
LRCH3Q96II8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.7■□□□□ 0.9
LRCH3Q96II8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.7■□□□□ 0.9
LRCH3Q96II8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH3Q96II8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.69■□□□□ 0.9
LRCH3Q96II8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.69■□□□□ 0.9
LRCH3Q96II8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms