Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.19■□□□□ 0.34
PTP4A1Q93096 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A1Q93096 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 AC090164.3-201ENST00000610780 2143 ntBASIC17.18■□□□□ 0.34
PTP4A1Q93096 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 KRT18P16-201ENST00000510337 1294 ntBASIC17.18■□□□□ 0.34
PTP4A1Q93096 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 AC060766.5-201ENST00000590539 871 ntBASIC17.18■□□□□ 0.34
PTP4A1Q93096 AL121906.2-201ENST00000621597 723 ntBASIC17.18■□□□□ 0.34
PTP4A1Q93096 AC135050.7-201ENST00000624508 2218 ntBASIC17.18■□□□□ 0.34
PTP4A1Q93096 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 AC092368.3-202ENST00000574180 1591 ntBASIC17.18■□□□□ 0.34
PTP4A1Q93096 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTP4A1Q93096 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.18■□□□□ 0.34
PTP4A1Q93096 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.17■□□□□ 0.34
PTP4A1Q93096 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PTP4A1Q93096 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PTP4A1Q93096 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PTP4A1Q93096 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.17■□□□□ 0.34
PTP4A1Q93096 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTP4A1Q93096 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTP4A1Q93096 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTP4A1Q93096 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.17■□□□□ 0.34
PTP4A1Q93096 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.17■□□□□ 0.34
PTP4A1Q93096 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.17■□□□□ 0.34
PTP4A1Q93096 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.17■□□□□ 0.34
PTP4A1Q93096 AC120498.8-201ENST00000614275 531 ntBASIC17.17■□□□□ 0.34
PTP4A1Q93096 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTP4A1Q93096 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTP4A1Q93096 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTP4A1Q93096 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTP4A1Q93096 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms