Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SHC3Q92529 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHC3Q92529 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.44■□□□□ 0.86
SHC3Q92529 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 ABHD17AP1-201ENST00000358206 933 ntBASIC20.44■□□□□ 0.86
SHC3Q92529 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.44■□□□□ 0.86
SHC3Q92529 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 GCSHP5-201ENST00000443090 522 ntBASIC20.44■□□□□ 0.86
SHC3Q92529 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.44■□□□□ 0.86
SHC3Q92529 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.44■□□□□ 0.86
SHC3Q92529 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.44■□□□□ 0.86
SHC3Q92529 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.44■□□□□ 0.86
SHC3Q92529 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SHC3Q92529 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SHC3Q92529 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 KRT16P1-201ENST00000399124 1418 ntBASIC20.44■□□□□ 0.86
SHC3Q92529 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC3Q92529 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
SHC3Q92529 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SHC3Q92529 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.43■□□□□ 0.86
SHC3Q92529 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC3Q92529 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC3Q92529 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.43■□□□□ 0.86
SHC3Q92529 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC3Q92529 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC3Q92529 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHC3Q92529 AC026271.3-201ENST00000571884 352 ntBASIC20.43■□□□□ 0.86
SHC3Q92529 AC073195.1-201ENST00000607241 877 ntBASIC20.43■□□□□ 0.86
SHC3Q92529 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SHC3Q92529 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC3Q92529 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SHC3Q92529 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHC3Q92529 KRT8P11-201ENST00000409686 1436 ntBASIC20.43■□□□□ 0.86
SHC3Q92529 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC3Q92529 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
SHC3Q92529 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SHC3Q92529 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SHC3Q92529 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHC3Q92529 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC3Q92529 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SHC3Q92529 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC3Q92529 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC3Q92529 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC3Q92529 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SHC3Q92529 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SHC3Q92529 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SHC3Q92529 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.42■□□□□ 0.86
SHC3Q92529 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SHC3Q92529 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.42■□□□□ 0.86
SHC3Q92529 AC142381.4-202ENST00000563973 229 ntBASIC20.42■□□□□ 0.86
SHC3Q92529 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.42■□□□□ 0.86
SHC3Q92529 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.42■□□□□ 0.86
SHC3Q92529 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC3Q92529 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHC3Q92529 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC3Q92529 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC3Q92529 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SHC3Q92529 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC3Q92529 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
SHC3Q92529 RCC2P6-201ENST00000526625 1557 ntBASIC20.42■□□□□ 0.86
SHC3Q92529 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHC3Q92529 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHC3Q92529 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHC3Q92529 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SHC3Q92529 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.41■□□□□ 0.86
SHC3Q92529 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHC3Q92529 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.41■□□□□ 0.86
SHC3Q92529 AC091390.4-202ENST00000476426 537 ntBASIC20.41■□□□□ 0.86
SHC3Q92529 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SHC3Q92529 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.41■□□□□ 0.86
SHC3Q92529 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.41■□□□□ 0.86
SHC3Q92529 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.41■□□□□ 0.86
SHC3Q92529 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SHC3Q92529 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHC3Q92529 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.41■□□□□ 0.86
SHC3Q92529 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHC3Q92529 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHC3Q92529 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.41■□□□□ 0.86
SHC3Q92529 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.41■□□□□ 0.86
SHC3Q92529 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHC3Q92529 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHC3Q92529 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHC3Q92529 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHC3Q92529 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.4■□□□□ 0.86
SHC3Q92529 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SHC3Q92529 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SHC3Q92529 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.4■□□□□ 0.86
SHC3Q92529 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SHC3Q92529 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.4■□□□□ 0.86
SHC3Q92529 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.4■□□□□ 0.86
SHC3Q92529 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms