Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 AC104187.1-201ENST00000607510 612 ntBASIC14.32□□□□□ -0.12
NUP35Q8NFH5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 AC009053.2-201ENST00000563701 2365 ntBASIC14.32□□□□□ -0.12
NUP35Q8NFH5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 AL136162.1-201ENST00000607711 1078 ntBASIC14.31□□□□□ -0.12
NUP35Q8NFH5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP35Q8NFH5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms