Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 AL645929.1-201ENST00000420084 975 ntBASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 GPAT2P1-201ENST00000444924 1672 ntBASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.53■□□□□ 0.88
NPAS4Q8IUM7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 AL691432.3-201ENST00000621860 400 ntBASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 TCF3P1-201ENST00000423021 1937 ntBASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS4Q8IUM7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NPAS4Q8IUM7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.52■□□□□ 0.87
NPAS4Q8IUM7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPAS4Q8IUM7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPAS4Q8IUM7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
NPAS4Q8IUM7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPAS4Q8IUM7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPAS4Q8IUM7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPAS4Q8IUM7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 AC092597.1-201ENST00000487352 616 ntBASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 NPAP1P7-201ENST00000613027 823 ntBASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS4Q8IUM7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 SDHAP1-207ENST00000440850 2000 ntBASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 AL023284.2-201ENST00000405850 579 ntBASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 AC026396.1-201ENST00000419388 421 ntBASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms