Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 UNC93B3-201ENST00000308076 687 ntBASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 AC126544.1-201ENST00000580842 1059 ntBASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 AL136162.1-201ENST00000607711 1078 ntBASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 AC135279.3-201ENST00000610945 1311 ntBASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 AC116050.2-201ENST00000612102 1779 ntBASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP4Q6PIL6 AC141586.5-201ENST00000624546 2050 ntBASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCNIP4Q6PIL6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP4Q6PIL6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms