Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.46□□□□□ -0.09
MRPL54Q6P161 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL54Q6P161 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.46□□□□□ -0.09
MRPL54Q6P161 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.46□□□□□ -0.09
MRPL54Q6P161 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.46□□□□□ -0.09
MRPL54Q6P161 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.46□□□□□ -0.09
MRPL54Q6P161 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.46□□□□□ -0.09
MRPL54Q6P161 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL54Q6P161 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.46□□□□□ -0.09
MRPL54Q6P161 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
MRPL54Q6P161 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
MRPL54Q6P161 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL54Q6P161 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL54Q6P161 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL54Q6P161 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
MRPL54Q6P161 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MRPL54Q6P161 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
MRPL54Q6P161 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
MRPL54Q6P161 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MRPL54Q6P161 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
MRPL54Q6P161 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
MRPL54Q6P161 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MRPL54Q6P161 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MRPL54Q6P161 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MRPL54Q6P161 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
MRPL54Q6P161 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MRPL54Q6P161 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
MRPL54Q6P161 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MRPL54Q6P161 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MRPL54Q6P161 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MRPL54Q6P161 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL54Q6P161 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL54Q6P161 AC009053.2-201ENST00000563701 2365 ntBASIC14.45□□□□□ -0.1
MRPL54Q6P161 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL54Q6P161 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL54Q6P161 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 KRT8P17-201ENST00000453110 1448 ntBASIC14.45□□□□□ -0.1
MRPL54Q6P161 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 AC009299.2-201ENST00000482477 511 ntBASIC14.45□□□□□ -0.1
MRPL54Q6P161 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL54Q6P161 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL54Q6P161 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL54Q6P161 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL54Q6P161 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL54Q6P161 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
MRPL54Q6P161 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL54Q6P161 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.44□□□□□ -0.1
MRPL54Q6P161 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL54Q6P161 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL54Q6P161 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.43□□□□□ -0.1
MRPL54Q6P161 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
MRPL54Q6P161 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL54Q6P161 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
MRPL54Q6P161 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL54Q6P161 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL54Q6P161 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms