Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LGSNQ5TDP6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LGSNQ5TDP6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LGSNQ5TDP6 MKRN4P-201ENST00000444706 1521 ntBASIC19.3■□□□□ 0.68
LGSNQ5TDP6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 WIZP1-201ENST00000531444 2299 ntBASIC19.3■□□□□ 0.68
LGSNQ5TDP6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 SDHAP1-207ENST00000440850 2000 ntBASIC19.3■□□□□ 0.68
LGSNQ5TDP6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 AC005082.1-201ENST00000413042 2259 ntBASIC19.3■□□□□ 0.68
LGSNQ5TDP6 AC009113.1-201ENST00000570267 2443 ntBASIC19.3■□□□□ 0.68
LGSNQ5TDP6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LGSNQ5TDP6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 YBX1P10-201ENST00000444752 975 ntBASIC19.29■□□□□ 0.68
LGSNQ5TDP6 AL162430.1-201ENST00000480705 870 ntBASIC19.29■□□□□ 0.68
LGSNQ5TDP6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 AP006587.1-201ENST00000534129 1502 ntBASIC19.29■□□□□ 0.68
LGSNQ5TDP6 AC104581.1-202ENST00000635932 2618 ntBASIC19.29■□□□□ 0.68
LGSNQ5TDP6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LGSNQ5TDP6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LGSNQ5TDP6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms