Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 MESTP1-201ENST00000404287 994 ntBASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 AC011506.1-201ENST00000474329 610 ntBASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 AL049637.2-201ENST00000641778 930 ntBASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN20Q4JDL3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 FEM1AP3-201ENST00000403722 1741 ntBASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN20Q4JDL3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 AC004951.3-201ENST00000418645 1148 ntBASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 B3GAT3P1-201ENST00000471720 806 ntBASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 KRT8P11-201ENST00000409686 1436 ntBASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN20Q4JDL3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 MIR6786-201ENST00000616843 113 ntBASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 AC011298.2-201ENST00000617989 482 ntBASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN20Q4JDL3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.14■□□□□ 0.82
PTPN20Q4JDL3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms