Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PCED1CP-201ENST00000419887 785 ntBASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 SPDYE15P-201ENST00000424157 909 ntBASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 AC091076.1-201ENST00000610741 619 ntBASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 HYMAI.1-201ENST00000620949 238 ntBASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 CR769767.2-201ENST00000622735 460 ntBASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SHROOM1Q2M3G4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 GPAT2P1-201ENST00000444924 1672 ntBASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 AC083849.1-201ENST00000615227 514 ntBASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 TREX1-205ENST00000625293 1783 ntBASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 LINC01521-201ENST00000504184 1943 ntBASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
SHROOM1Q2M3G4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 AP000550.4-202ENST00000639755 178 ntBASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.36■■□□□ 1.17
SHROOM1Q2M3G4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 AC005332.1-201ENST00000577698 1310 ntBASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 HOMER2P1-201ENST00000455653 964 ntBASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 AL121956.5-201ENST00000625261 221 ntBASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
SHROOM1Q2M3G4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms