Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH17Q12864 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDH17Q12864 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH17Q12864 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CDH17Q12864 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDH17Q12864 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH17Q12864 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.35■□□□□ 0.69
CDH17Q12864 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 POU5F1P3-201ENST00000428824 1078 ntBASIC19.35■□□□□ 0.69
CDH17Q12864 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CDH17Q12864 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH17Q12864 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH17Q12864 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH17Q12864 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH17Q12864 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDH17Q12864 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDH17Q12864 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH17Q12864 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.34■□□□□ 0.69
CDH17Q12864 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH17Q12864 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH17Q12864 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH17Q12864 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.34■□□□□ 0.69
CDH17Q12864 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.34■□□□□ 0.69
CDH17Q12864 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.34■□□□□ 0.69
CDH17Q12864 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDH17Q12864 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH17Q12864 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CDH17Q12864 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH17Q12864 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.33■□□□□ 0.69
CDH17Q12864 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.33■□□□□ 0.69
CDH17Q12864 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH17Q12864 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.33■□□□□ 0.69
CDH17Q12864 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH17Q12864 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH17Q12864 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH17Q12864 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH17Q12864 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH17Q12864 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH17Q12864 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH17Q12864 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH17Q12864 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH17Q12864 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CDH17Q12864 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH17Q12864 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH17Q12864 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH17Q12864 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH17Q12864 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CDH17Q12864 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH17Q12864 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH17Q12864 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH17Q12864 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDH17Q12864 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH17Q12864 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH17Q12864 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CDH17Q12864 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH17Q12864 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CDH17Q12864 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH17Q12864 CROCCP3-202ENST00000420820 1947 ntBASIC19.32■□□□□ 0.68
CDH17Q12864 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDH17Q12864 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.32■□□□□ 0.68
CDH17Q12864 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDH17Q12864 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDH17Q12864 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDH17Q12864 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH17Q12864 C1QBPP2-201ENST00000528754 825 ntBASIC19.32■□□□□ 0.68
CDH17Q12864 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH17Q12864 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH17Q12864 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH17Q12864 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.32■□□□□ 0.68
CDH17Q12864 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH17Q12864 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH17Q12864 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH17Q12864 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDH17Q12864 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH17Q12864 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms