Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SYCNQ0VAF6 NBPF21P-201ENST00000425093 1451 ntBASIC12.65□□□□□ -0.38
SYCNQ0VAF6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC12.65□□□□□ -0.38
SYCNQ0VAF6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms