Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.07□□□□□ -0.48
RBM3P98179 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.07□□□□□ -0.48
RBM3P98179 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
RBM3P98179 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RBM3P98179 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
RBM3P98179 AC004987.1-201ENST00000428627 508 ntBASIC12.07□□□□□ -0.48
RBM3P98179 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
RBM3P98179 AC103834.1-201ENST00000520383 144 ntBASIC12.07□□□□□ -0.48
RBM3P98179 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 AC067852.2-201ENST00000590513 2313 ntBASIC12.07□□□□□ -0.48
RBM3P98179 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
RBM3P98179 AC053503.5-201ENST00000601508 636 ntBASIC12.07□□□□□ -0.48
RBM3P98179 AC093525.10-201ENST00000625130 1569 ntBASIC12.07□□□□□ -0.48
RBM3P98179 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC12.07□□□□□ -0.48
RBM3P98179 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RBM3P98179 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.07□□□□□ -0.48
RBM3P98179 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 AL356309.3-201ENST00000624132 1934 ntBASIC12.07□□□□□ -0.48
RBM3P98179 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
RBM3P98179 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.07□□□□□ -0.48
RBM3P98179 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
RBM3P98179 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RBM3P98179 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
RBM3P98179 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.07□□□□□ -0.48
RBM3P98179 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.07□□□□□ -0.48
RBM3P98179 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.06□□□□□ -0.48
RBM3P98179 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
RBM3P98179 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.06□□□□□ -0.48
RBM3P98179 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC12.06□□□□□ -0.48
RBM3P98179 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RBM3P98179 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.06□□□□□ -0.48
RBM3P98179 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.06□□□□□ -0.48
RBM3P98179 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RBM3P98179 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RBM3P98179 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
RBM3P98179 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
RBM3P98179 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC12.06□□□□□ -0.48
RBM3P98179 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
RBM3P98179 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 AC008175.2-201ENST00000612840 297 ntBASIC12.06□□□□□ -0.48
RBM3P98179 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
RBM3P98179 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.06□□□□□ -0.48
RBM3P98179 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
RBM3P98179 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
RBM3P98179 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.06□□□□□ -0.48
RBM3P98179 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RBM3P98179 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC12.05□□□□□ -0.48
RBM3P98179 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.05□□□□□ -0.48
RBM3P98179 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 AP001271.2-201ENST00000624018 1556 ntBASIC12.05□□□□□ -0.48
RBM3P98179 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RBM3P98179 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms