Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDE1AP54750 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
PDE1AP54750 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.42■■□□□ 1.34
PDE1AP54750 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDE1AP54750 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDE1AP54750 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDE1AP54750 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDE1AP54750 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDE1AP54750 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PDE1AP54750 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDE1AP54750 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDE1AP54750 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDE1AP54750 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
PDE1AP54750 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.41■■□□□ 1.34
PDE1AP54750 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.41■■□□□ 1.34
PDE1AP54750 AL020996.1-203ENST00000536896 2307 ntBASIC23.41■■□□□ 1.34
PDE1AP54750 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
PDE1AP54750 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.41■■□□□ 1.34
PDE1AP54750 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.41■■□□□ 1.34
PDE1AP54750 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDE1AP54750 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
PDE1AP54750 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.41■■□□□ 1.34
PDE1AP54750 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.41■■□□□ 1.34
PDE1AP54750 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PDE1AP54750 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDE1AP54750 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDE1AP54750 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
PDE1AP54750 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.4■■□□□ 1.34
PDE1AP54750 RCC2P6-201ENST00000526625 1557 ntBASIC23.4■■□□□ 1.34
PDE1AP54750 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDE1AP54750 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDE1AP54750 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PDE1AP54750 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDE1AP54750 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.4■■□□□ 1.34
PDE1AP54750 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PDE1AP54750 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.4■■□□□ 1.34
PDE1AP54750 AC091390.4-202ENST00000476426 537 ntBASIC23.4■■□□□ 1.34
PDE1AP54750 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.4■■□□□ 1.34
PDE1AP54750 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.4■■□□□ 1.34
PDE1AP54750 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PDE1AP54750 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.4■■□□□ 1.34
PDE1AP54750 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC23.4■■□□□ 1.34
PDE1AP54750 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PDE1AP54750 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDE1AP54750 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PDE1AP54750 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PDE1AP54750 KRT8P11-201ENST00000409686 1436 ntBASIC23.4■■□□□ 1.34
PDE1AP54750 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDE1AP54750 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDE1AP54750 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
PDE1AP54750 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PDE1AP54750 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
PDE1AP54750 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
PDE1AP54750 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PDE1AP54750 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.39■■□□□ 1.34
PDE1AP54750 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PDE1AP54750 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PDE1AP54750 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
PDE1AP54750 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.39■■□□□ 1.33
PDE1AP54750 UBE2SP1-201ENST00000450587 669 ntBASIC23.39■■□□□ 1.33
PDE1AP54750 AC008040.2-201ENST00000461049 708 ntBASIC23.39■■□□□ 1.33
PDE1AP54750 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PDE1AP54750 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.39■■□□□ 1.33
PDE1AP54750 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PDE1AP54750 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.33
PDE1AP54750 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PDE1AP54750 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PDE1AP54750 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PDE1AP54750 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.39■■□□□ 1.33
PDE1AP54750 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PDE1AP54750 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
PDE1AP54750 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PDE1AP54750 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
PDE1AP54750 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.38■■□□□ 1.33
PDE1AP54750 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDE1AP54750 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.38■■□□□ 1.33
PDE1AP54750 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDE1AP54750 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PDE1AP54750 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDE1AP54750 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.38■■□□□ 1.33
PDE1AP54750 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDE1AP54750 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDE1AP54750 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.38■■□□□ 1.33
PDE1AP54750 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.38■■□□□ 1.33
PDE1AP54750 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDE1AP54750 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
PDE1AP54750 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDE1AP54750 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.38■■□□□ 1.33
PDE1AP54750 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PDE1AP54750 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDE1AP54750 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.37■■□□□ 1.33
PDE1AP54750 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDE1AP54750 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDE1AP54750 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
PDE1AP54750 AC011506.1-201ENST00000474329 610 ntBASIC23.37■■□□□ 1.33
PDE1AP54750 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDE1AP54750 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.37■■□□□ 1.33
PDE1AP54750 AL031985.4-201ENST00000642138 673 ntBASIC23.37■■□□□ 1.33
PDE1AP54750 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
PDE1AP54750 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms