Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CTNNA1P35221 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNNA1P35221 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.22■□□□□ 0.83
CTNNA1P35221 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.21■□□□□ 0.83
CTNNA1P35221 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.21■□□□□ 0.83
CTNNA1P35221 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.21■□□□□ 0.83
CTNNA1P35221 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.21■□□□□ 0.83
CTNNA1P35221 KRT18P16-201ENST00000510337 1294 ntBASIC20.21■□□□□ 0.83
CTNNA1P35221 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.21■□□□□ 0.83
CTNNA1P35221 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CTNNA1P35221 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 AC005332.8-201ENST00000622750 2735 ntBASIC20.21■□□□□ 0.83
CTNNA1P35221 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
CTNNA1P35221 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.21■□□□□ 0.83
CTNNA1P35221 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNNA1P35221 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNNA1P35221 AC104581.1-202ENST00000635932 2618 ntBASIC20.2■□□□□ 0.82
CTNNA1P35221 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTNNA1P35221 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CTNNA1P35221 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CTNNA1P35221 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
CTNNA1P35221 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNNA1P35221 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNNA1P35221 AC083880.1-201ENST00000608266 535 ntBASIC20.2■□□□□ 0.82
CTNNA1P35221 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.2■□□□□ 0.82
CTNNA1P35221 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 FP475955.4-201ENST00000623131 1990 ntBASIC20.2■□□□□ 0.82
CTNNA1P35221 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CTNNA1P35221 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNNA1P35221 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CTNNA1P35221 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CTNNA1P35221 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNNA1P35221 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNNA1P35221 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.19■□□□□ 0.82
CTNNA1P35221 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTNNA1P35221 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CTNNA1P35221 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.19■□□□□ 0.82
CTNNA1P35221 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.19■□□□□ 0.82
CTNNA1P35221 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.19■□□□□ 0.82
CTNNA1P35221 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.19■□□□□ 0.82
CTNNA1P35221 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.19■□□□□ 0.82
CTNNA1P35221 AC098934.4-201ENST00000564127 592 ntBASIC20.19■□□□□ 0.82
CTNNA1P35221 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.19■□□□□ 0.82
CTNNA1P35221 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
CTNNA1P35221 AC120498.8-201ENST00000614275 531 ntBASIC20.19■□□□□ 0.82
CTNNA1P35221 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CTNNA1P35221 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.19■□□□□ 0.82
CTNNA1P35221 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.19■□□□□ 0.82
CTNNA1P35221 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CTNNA1P35221 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.19■□□□□ 0.82
CTNNA1P35221 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTNNA1P35221 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CTNNA1P35221 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNNA1P35221 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTNNA1P35221 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNNA1P35221 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNNA1P35221 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNNA1P35221 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNNA1P35221 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTNNA1P35221 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CTNNA1P35221 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.18■□□□□ 0.82
CTNNA1P35221 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNNA1P35221 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNNA1P35221 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CTNNA1P35221 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNNA1P35221 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNNA1P35221 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNNA1P35221 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms