Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.93■□□□□ 0.62
HOXA6P31267 AL022342.1-201ENST00000400363 863 ntBASIC18.93■□□□□ 0.62
HOXA6P31267 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA6P31267 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.93■□□□□ 0.62
HOXA6P31267 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.93■□□□□ 0.62
HOXA6P31267 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.93■□□□□ 0.62
HOXA6P31267 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.93■□□□□ 0.62
HOXA6P31267 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
HOXA6P31267 MIR3917-201ENST00000580971 93 ntBASIC18.93■□□□□ 0.62
HOXA6P31267 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.93■□□□□ 0.62
HOXA6P31267 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA6P31267 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA6P31267 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA6P31267 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA6P31267 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 AL391807.1-203ENST00000604392 2365 ntBASIC18.92■□□□□ 0.62
HOXA6P31267 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HOXA6P31267 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA6P31267 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 AL662844.1-201ENST00000546340 181 ntBASIC18.92■□□□□ 0.62
HOXA6P31267 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.92■□□□□ 0.62
HOXA6P31267 AL732292.2-201ENST00000609649 430 ntBASIC18.92■□□□□ 0.62
HOXA6P31267 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HOXA6P31267 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HOXA6P31267 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HOXA6P31267 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA6P31267 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HOXA6P31267 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA6P31267 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HOXA6P31267 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXA6P31267 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXA6P31267 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXA6P31267 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 AC036111.1-201ENST00000533973 1582 ntBASIC18.91■□□□□ 0.62
HOXA6P31267 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 KRT18P31-201ENST00000506277 1292 ntBASIC18.91■□□□□ 0.62
HOXA6P31267 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.91■□□□□ 0.62
HOXA6P31267 AC112497.1-201ENST00000624824 639 ntBASIC18.91■□□□□ 0.62
HOXA6P31267 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HOXA6P31267 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA6P31267 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HOXA6P31267 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXA6P31267 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 AC020907.5-201ENST00000624372 1936 ntBASIC18.9■□□□□ 0.62
HOXA6P31267 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXA6P31267 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXA6P31267 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXA6P31267 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXA6P31267 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 MCCD1P1-208ENST00000445732 328 ntBASIC18.9■□□□□ 0.62
HOXA6P31267 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA6P31267 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXA6P31267 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXA6P31267 AL157888.1-201ENST00000631930 593 ntBASIC18.9■□□□□ 0.62
HOXA6P31267 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXA6P31267 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HOXA6P31267 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 AC026310.3-201ENST00000625186 2373 ntBASIC18.9■□□□□ 0.62
HOXA6P31267 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HOXA6P31267 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA6P31267 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA6P31267 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXA6P31267 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXA6P31267 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HOXA6P31267 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
HOXA6P31267 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.89■□□□□ 0.62
HOXA6P31267 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXA6P31267 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXA6P31267 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXA6P31267 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA6P31267 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA6P31267 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXA6P31267 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA6P31267 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA6P31267 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms