Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 AL356441.2-201ENST00000443009 864 ntBASIC15.32■□□□□ 0.04
ATP6V0CP27449 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 ESPNP-201ENST00000270691 2015 ntBASIC15.32■□□□□ 0.04
ATP6V0CP27449 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ATP6V0CP27449 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP6V0CP27449 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.31■□□□□ 0.04
ATP6V0CP27449 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP6V0CP27449 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP6V0CP27449 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 AC099398.1-201ENST00000567919 2776 ntBASIC15.3■□□□□ 0.04
ATP6V0CP27449 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms