Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCF4P15884 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCF4P15884 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.97■□□□□ 0.79
TCF4P15884 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCF4P15884 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCF4P15884 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCF4P15884 FEM1AP3-201ENST00000403722 1741 ntBASIC19.97■□□□□ 0.79
TCF4P15884 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.97■□□□□ 0.79
TCF4P15884 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCF4P15884 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCF4P15884 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCF4P15884 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TCF4P15884 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.97■□□□□ 0.79
TCF4P15884 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.97■□□□□ 0.79
TCF4P15884 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.97■□□□□ 0.79
TCF4P15884 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.97■□□□□ 0.79
TCF4P15884 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.97■□□□□ 0.79
TCF4P15884 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCF4P15884 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCF4P15884 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.97■□□□□ 0.79
TCF4P15884 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TCF4P15884 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TCF4P15884 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.96■□□□□ 0.79
TCF4P15884 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 PRORSD1P-201ENST00000295112 541 ntBASIC19.96■□□□□ 0.79
TCF4P15884 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 RPS2P4-201ENST00000476944 856 ntBASIC19.96■□□□□ 0.79
TCF4P15884 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.96■□□□□ 0.79
TCF4P15884 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TCF4P15884 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.96■□□□□ 0.79
TCF4P15884 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.96■□□□□ 0.79
TCF4P15884 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.96■□□□□ 0.79
TCF4P15884 AC120498.9-201ENST00000339021 3867 ntBASIC19.96■□□□□ 0.79
TCF4P15884 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.96■□□□□ 0.79
TCF4P15884 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TCF4P15884 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TCF4P15884 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCF4P15884 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
TCF4P15884 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCF4P15884 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCF4P15884 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.95■□□□□ 0.78
TCF4P15884 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.95■□□□□ 0.78
TCF4P15884 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCF4P15884 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.95■□□□□ 0.78
TCF4P15884 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCF4P15884 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.95■□□□□ 0.78
TCF4P15884 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.95■□□□□ 0.78
TCF4P15884 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.95■□□□□ 0.78
TCF4P15884 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCF4P15884 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCF4P15884 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.95■□□□□ 0.78
TCF4P15884 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TCF4P15884 ITM2C-210ENST00000620962 501 ntBASIC19.95■□□□□ 0.78
TCF4P15884 AL359736.2-201ENST00000621992 437 ntBASIC19.95■□□□□ 0.78
TCF4P15884 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCF4P15884 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCF4P15884 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCF4P15884 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
TCF4P15884 HTR7P1-201ENST00000538670 1336 ntBASIC19.95■□□□□ 0.78
TCF4P15884 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.94■□□□□ 0.78
TCF4P15884 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TCF4P15884 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.94■□□□□ 0.78
TCF4P15884 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 AC098590.1-201ENST00000468126 897 ntBASIC19.94■□□□□ 0.78
TCF4P15884 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.94■□□□□ 0.78
TCF4P15884 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.94■□□□□ 0.78
TCF4P15884 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.94■□□□□ 0.78
TCF4P15884 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TCF4P15884 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCF4P15884 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCF4P15884 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TCF4P15884 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
TCF4P15884 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCF4P15884 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms