Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC172P0C7W6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 SDHAP1-207ENST00000440850 2000 ntBASIC20.68■□□□□ 0.9
CCDC172P0C7W6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CCDC172P0C7W6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 AC090192.1-201ENST00000517740 490 ntBASIC20.67■□□□□ 0.9
CCDC172P0C7W6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 AC093503.3-201ENST00000624917 2352 ntBASIC20.67■□□□□ 0.9
CCDC172P0C7W6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC172P0C7W6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 UNC93B5-201ENST00000530315 699 ntBASIC20.66■□□□□ 0.9
CCDC172P0C7W6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC172P0C7W6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 FP475955.4-201ENST00000623131 1990 ntBASIC20.65■□□□□ 0.9
CCDC172P0C7W6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms