Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.85■□□□□ 0.77
CD48P09326 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CD48P09326 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 PRORSD1P-201ENST00000295112 541 ntBASIC19.85■□□□□ 0.77
CD48P09326 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.85■□□□□ 0.77
CD48P09326 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.85■□□□□ 0.77
CD48P09326 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.85■□□□□ 0.77
CD48P09326 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CD48P09326 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CD48P09326 AL359736.2-201ENST00000621992 437 ntBASIC19.85■□□□□ 0.77
CD48P09326 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.85■□□□□ 0.77
CD48P09326 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.85■□□□□ 0.77
CD48P09326 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.85■□□□□ 0.77
CD48P09326 FEM1AP3-201ENST00000403722 1741 ntBASIC19.85■□□□□ 0.77
CD48P09326 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CD48P09326 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.84■□□□□ 0.77
CD48P09326 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.84■□□□□ 0.77
CD48P09326 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.84■□□□□ 0.77
CD48P09326 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CD48P09326 TSPY23P-201ENST00000440136 739 ntBASIC19.84■□□□□ 0.77
CD48P09326 RPS2P4-201ENST00000476944 856 ntBASIC19.84■□□□□ 0.77
CD48P09326 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.84■□□□□ 0.77
CD48P09326 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.84■□□□□ 0.77
CD48P09326 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.84■□□□□ 0.77
CD48P09326 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.84■□□□□ 0.77
CD48P09326 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.84■□□□□ 0.77
CD48P09326 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CD48P09326 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD48P09326 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CD48P09326 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD48P09326 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD48P09326 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD48P09326 KRT18P29-201ENST00000397031 1267 ntBASIC19.83■□□□□ 0.77
CD48P09326 NIFKP9-201ENST00000419265 221 ntBASIC19.83■□□□□ 0.77
CD48P09326 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CD48P09326 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.83■□□□□ 0.77
CD48P09326 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.83■□□□□ 0.77
CD48P09326 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD48P09326 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.83■□□□□ 0.77
CD48P09326 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.83■□□□□ 0.77
CD48P09326 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CD48P09326 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.83■□□□□ 0.77
CD48P09326 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD48P09326 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD48P09326 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CD48P09326 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.83■□□□□ 0.76
CD48P09326 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD48P09326 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD48P09326 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CD48P09326 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CD48P09326 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CD48P09326 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.82■□□□□ 0.76
CD48P09326 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.82■□□□□ 0.76
CD48P09326 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.82■□□□□ 0.76
CD48P09326 AC098590.1-201ENST00000468126 897 ntBASIC19.82■□□□□ 0.76
CD48P09326 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.82■□□□□ 0.76
CD48P09326 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.82■□□□□ 0.76
CD48P09326 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.82■□□□□ 0.76
CD48P09326 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.82■□□□□ 0.76
CD48P09326 AL445675.2-201ENST00000620291 557 ntBASIC19.82■□□□□ 0.76
CD48P09326 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.82■□□□□ 0.76
CD48P09326 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CD48P09326 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms