Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 TMEM179-206ENST00000616017 1645 ntBASIC18.8■□□□□ 0.6
CPNE6O95741 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.8■□□□□ 0.6
CPNE6O95741 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CPNE6O95741 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CPNE6O95741 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CPNE6O95741 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE6O95741 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE6O95741 AL158211.5-201ENST00000623583 2518 ntBASIC18.79■□□□□ 0.6
CPNE6O95741 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.79■□□□□ 0.6
CPNE6O95741 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE6O95741 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.79■□□□□ 0.6
CPNE6O95741 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CPNE6O95741 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE6O95741 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE6O95741 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE6O95741 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CPNE6O95741 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.79■□□□□ 0.6
CPNE6O95741 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.79■□□□□ 0.6
CPNE6O95741 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE6O95741 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.79■□□□□ 0.6
CPNE6O95741 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.79■□□□□ 0.6
CPNE6O95741 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.79■□□□□ 0.6
CPNE6O95741 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE6O95741 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.79■□□□□ 0.6
CPNE6O95741 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE6O95741 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE6O95741 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CPNE6O95741 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CPNE6O95741 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 RCC2P6-201ENST00000526625 1557 ntBASIC18.78■□□□□ 0.6
CPNE6O95741 AC073508.3-201ENST00000619697 1419 ntBASIC18.78■□□□□ 0.6
CPNE6O95741 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 TSPY14P-201ENST00000303979 915 ntBASIC18.78■□□□□ 0.6
CPNE6O95741 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CPNE6O95741 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE6O95741 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE6O95741 KRT18P35-201ENST00000510488 1269 ntBASIC18.78■□□□□ 0.6
CPNE6O95741 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 SLC25A1P4-201ENST00000567977 778 ntBASIC18.78■□□□□ 0.6
CPNE6O95741 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 AP000692.2-201ENST00000608391 879 ntBASIC18.78■□□□□ 0.6
CPNE6O95741 AC011298.2-201ENST00000617989 482 ntBASIC18.78■□□□□ 0.6
CPNE6O95741 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE6O95741 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.78■□□□□ 0.6
CPNE6O95741 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE6O95741 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CPNE6O95741 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE6O95741 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE6O95741 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE6O95741 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE6O95741 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CPNE6O95741 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CPNE6O95741 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.77■□□□□ 0.6
CPNE6O95741 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CPNE6O95741 AC004951.3-201ENST00000418645 1148 ntBASIC18.77■□□□□ 0.6
CPNE6O95741 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE6O95741 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE6O95741 AC128688.1-201ENST00000487626 519 ntBASIC18.77■□□□□ 0.6
CPNE6O95741 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.77■□□□□ 0.6
CPNE6O95741 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.77■□□□□ 0.6
CPNE6O95741 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CPNE6O95741 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE6O95741 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.77■□□□□ 0.6
CPNE6O95741 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE6O95741 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE6O95741 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE6O95741 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CPNE6O95741 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CPNE6O95741 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE6O95741 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.77■□□□□ 0.59
CPNE6O95741 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE6O95741 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE6O95741 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE6O95741 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE6O95741 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CPNE6O95741 AP001271.2-201ENST00000624018 1556 ntBASIC18.76■□□□□ 0.59
CPNE6O95741 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CPNE6O95741 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE6O95741 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE6O95741 KRT8P8-201ENST00000434750 1448 ntBASIC18.76■□□□□ 0.59
CPNE6O95741 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE6O95741 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE6O95741 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms