Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CBX6O95503 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CBX6O95503 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.06■□□□□ 0.64
CBX6O95503 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.06■□□□□ 0.64
CBX6O95503 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.06■□□□□ 0.64
CBX6O95503 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX6O95503 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX6O95503 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CBX6O95503 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX6O95503 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX6O95503 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.06■□□□□ 0.64
CBX6O95503 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CBX6O95503 AP001271.2-201ENST00000624018 1556 ntBASIC19.06■□□□□ 0.64
CBX6O95503 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CBX6O95503 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX6O95503 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX6O95503 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.05■□□□□ 0.64
CBX6O95503 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CBX6O95503 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
CBX6O95503 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.05■□□□□ 0.64
CBX6O95503 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.05■□□□□ 0.64
CBX6O95503 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.05■□□□□ 0.64
CBX6O95503 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.05■□□□□ 0.64
CBX6O95503 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.05■□□□□ 0.64
CBX6O95503 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.05■□□□□ 0.64
CBX6O95503 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.05■□□□□ 0.64
CBX6O95503 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.05■□□□□ 0.64
CBX6O95503 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.05■□□□□ 0.64
CBX6O95503 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.05■□□□□ 0.64
CBX6O95503 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CBX6O95503 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.05■□□□□ 0.64
CBX6O95503 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.05■□□□□ 0.64
CBX6O95503 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX6O95503 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.04■□□□□ 0.64
CBX6O95503 PTBP1P-201ENST00000554374 1601 ntBASIC19.04■□□□□ 0.64
CBX6O95503 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.04■□□□□ 0.64
CBX6O95503 AL031598.1-201ENST00000561511 1773 ntBASIC19.04■□□□□ 0.64
CBX6O95503 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CBX6O95503 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CBX6O95503 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CBX6O95503 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CBX6O95503 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CBX6O95503 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.04■□□□□ 0.64
CBX6O95503 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.04■□□□□ 0.64
CBX6O95503 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.04■□□□□ 0.64
CBX6O95503 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.04■□□□□ 0.64
CBX6O95503 AL162412.1-201ENST00000567129 965 ntBASIC19.04■□□□□ 0.64
CBX6O95503 AC010980.2-201ENST00000587099 1412 ntBASIC19.04■□□□□ 0.64
CBX6O95503 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX6O95503 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CBX6O95503 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.03■□□□□ 0.64
CBX6O95503 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CBX6O95503 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.03■□□□□ 0.64
CBX6O95503 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CBX6O95503 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX6O95503 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.03■□□□□ 0.64
CBX6O95503 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CBX6O95503 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.03■□□□□ 0.64
CBX6O95503 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.03■□□□□ 0.64
CBX6O95503 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms