Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH8O95206 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH8O95206 ARMC10P1-201ENST00000313754 855 ntBASIC19.14■□□□□ 0.65
PCDH8O95206 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH8O95206 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH8O95206 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH8O95206 AC104076.2-201ENST00000448912 469 ntBASIC19.14■□□□□ 0.65
PCDH8O95206 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDH8O95206 CA15P1-201ENST00000481698 905 ntBASIC19.14■□□□□ 0.65
PCDH8O95206 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PCDH8O95206 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH8O95206 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PCDH8O95206 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
PCDH8O95206 AL353719.1-201ENST00000566847 864 ntBASIC19.14■□□□□ 0.65
PCDH8O95206 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDH8O95206 AL023803.3-201ENST00000615559 522 ntBASIC19.14■□□□□ 0.65
PCDH8O95206 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH8O95206 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH8O95206 AC092338.2-201ENST00000568827 1415 ntBASIC19.14■□□□□ 0.65
PCDH8O95206 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH8O95206 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH8O95206 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH8O95206 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH8O95206 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDH8O95206 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH8O95206 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDH8O95206 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDH8O95206 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PCDH8O95206 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH8O95206 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH8O95206 KRT18P35-201ENST00000510488 1269 ntBASIC19.13■□□□□ 0.65
PCDH8O95206 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH8O95206 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH8O95206 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH8O95206 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH8O95206 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDH8O95206 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH8O95206 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDH8O95206 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 AC138932.1-201ENST00000534164 6830 ntBASIC19.13■□□□□ 0.65
PCDH8O95206 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH8O95206 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH8O95206 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
PCDH8O95206 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
PCDH8O95206 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH8O95206 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH8O95206 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDH8O95206 DUX4L26-201ENST00000489078 1255 ntBASIC19.12■□□□□ 0.65
PCDH8O95206 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDH8O95206 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH8O95206 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH8O95206 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH8O95206 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDH8O95206 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 SDHAP1-207ENST00000440850 2000 ntBASIC19.12■□□□□ 0.65
PCDH8O95206 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDH8O95206 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH8O95206 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH8O95206 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.11■□□□□ 0.65
PCDH8O95206 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDH8O95206 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 BX664615.1-201ENST00000443558 458 ntBASIC19.11■□□□□ 0.65
PCDH8O95206 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH8O95206 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH8O95206 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PCDH8O95206 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms