Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF13O43567 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF13O43567 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF13O43567 TUBB8P6-201ENST00000436895 1288 ntBASIC17.43■□□□□ 0.38
RNF13O43567 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF13O43567 AP003097.1-201ENST00000530657 1135 ntBASIC17.43■□□□□ 0.38
RNF13O43567 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.43■□□□□ 0.38
RNF13O43567 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF13O43567 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF13O43567 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
RNF13O43567 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF13O43567 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF13O43567 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RNF13O43567 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RNF13O43567 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF13O43567 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF13O43567 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF13O43567 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RNF13O43567 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RNF13O43567 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RNF13O43567 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF13O43567 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF13O43567 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RNF13O43567 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF13O43567 KRT17P3-201ENST00000420566 1262 ntBASIC17.42■□□□□ 0.38
RNF13O43567 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF13O43567 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF13O43567 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RNF13O43567 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF13O43567 CROCCP3-202ENST00000420820 1947 ntBASIC17.42■□□□□ 0.38
RNF13O43567 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF13O43567 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF13O43567 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 AC005082.1-201ENST00000413042 2259 ntBASIC17.42■□□□□ 0.38
RNF13O43567 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF13O43567 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF13O43567 LETM1P2-201ENST00000597330 2178 ntBASIC17.42■□□□□ 0.38
RNF13O43567 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RNF13O43567 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF13O43567 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF13O43567 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF13O43567 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF13O43567 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
RNF13O43567 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RNF13O43567 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF13O43567 KRT18P6-201ENST00000555540 1265 ntBASIC17.41■□□□□ 0.38
RNF13O43567 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF13O43567 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF13O43567 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF13O43567 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF13O43567 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RNF13O43567 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RNF13O43567 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
RNF13O43567 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF13O43567 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF13O43567 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
RNF13O43567 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF13O43567 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF13O43567 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RNF13O43567 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF13O43567 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF13O43567 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms