Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK2O43353 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK2O43353 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.47■□□□□ 0.71
RIPK2O43353 AC016769.1-201ENST00000409132 1010 ntBASIC19.47■□□□□ 0.71
RIPK2O43353 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK2O43353 AC231657.2-201ENST00000624556 255 ntBASIC19.47■□□□□ 0.71
RIPK2O43353 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK2O43353 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.47■□□□□ 0.71
RIPK2O43353 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK2O43353 ABALON-201ENST00000629058 1903 ntBASIC19.47■□□□□ 0.71
RIPK2O43353 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK2O43353 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK2O43353 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.47■□□□□ 0.71
RIPK2O43353 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.46■□□□□ 0.71
RIPK2O43353 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK2O43353 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK2O43353 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK2O43353 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RIPK2O43353 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK2O43353 KRT8P8-201ENST00000434750 1448 ntBASIC19.46■□□□□ 0.71
RIPK2O43353 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
RIPK2O43353 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
RIPK2O43353 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.46■□□□□ 0.71
RIPK2O43353 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.46■□□□□ 0.71
RIPK2O43353 AC073210.2-201ENST00000430369 194 ntBASIC19.46■□□□□ 0.71
RIPK2O43353 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK2O43353 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
RIPK2O43353 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.46■□□□□ 0.71
RIPK2O43353 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK2O43353 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK2O43353 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RIPK2O43353 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK2O43353 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIPK2O43353 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.45■□□□□ 0.7
RIPK2O43353 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RIPK2O43353 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RIPK2O43353 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RIPK2O43353 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK2O43353 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK2O43353 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK2O43353 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK2O43353 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 LSM12P1-201ENST00000411836 588 ntBASIC19.45■□□□□ 0.7
RIPK2O43353 AC007322.1-201ENST00000426983 750 ntBASIC19.45■□□□□ 0.7
RIPK2O43353 AC006015.1-201ENST00000429970 570 ntBASIC19.45■□□□□ 0.7
RIPK2O43353 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.45■□□□□ 0.7
RIPK2O43353 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.45■□□□□ 0.7
RIPK2O43353 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RIPK2O43353 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
RIPK2O43353 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.45■□□□□ 0.7
RIPK2O43353 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK2O43353 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK2O43353 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
RIPK2O43353 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.44■□□□□ 0.7
RIPK2O43353 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
RIPK2O43353 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.44■□□□□ 0.7
RIPK2O43353 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
RIPK2O43353 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.44■□□□□ 0.7
RIPK2O43353 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RIPK2O43353 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK2O43353 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.44■□□□□ 0.7
RIPK2O43353 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
RIPK2O43353 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.43■□□□□ 0.7
RIPK2O43353 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RIPK2O43353 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RIPK2O43353 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.43■□□□□ 0.7
RIPK2O43353 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RIPK2O43353 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms