Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.94■■□□□ 1.1
ATP2A1O14983 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.94■■□□□ 1.1
ATP2A1O14983 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.94■■□□□ 1.1
ATP2A1O14983 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
ATP2A1O14983 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
ATP2A1O14983 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 LINC01006-201ENST00000333319 2292 ntBASIC21.94■■□□□ 1.1
ATP2A1O14983 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP2A1O14983 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.93■■□□□ 1.1
ATP2A1O14983 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.93■■□□□ 1.1
ATP2A1O14983 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
ATP2A1O14983 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP2A1O14983 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP2A1O14983 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP2A1O14983 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ATP2A1O14983 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP2A1O14983 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
ATP2A1O14983 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ATP2A1O14983 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.93■■□□□ 1.1
ATP2A1O14983 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.93■■□□□ 1.1
ATP2A1O14983 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ATP2A1O14983 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.93■■□□□ 1.1
ATP2A1O14983 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.93■■□□□ 1.1
ATP2A1O14983 MIR4674-201ENST00000582457 87 ntBASIC21.93■■□□□ 1.1
ATP2A1O14983 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.93■■□□□ 1.1
ATP2A1O14983 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.93■■□□□ 1.1
ATP2A1O14983 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP2A1O14983 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.92■■□□□ 1.1
ATP2A1O14983 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP2A1O14983 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.92■■□□□ 1.1
ATP2A1O14983 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP2A1O14983 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP2A1O14983 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP2A1O14983 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP2A1O14983 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP2A1O14983 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP2A1O14983 FAM86EP-206ENST00000510506 987 ntBASIC21.92■■□□□ 1.1
ATP2A1O14983 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.92■■□□□ 1.1
ATP2A1O14983 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP2A1O14983 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.92■■□□□ 1.1
ATP2A1O14983 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.92■■□□□ 1.1
ATP2A1O14983 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.92■■□□□ 1.1
ATP2A1O14983 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP2A1O14983 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ATP2A1O14983 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP2A1O14983 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
ATP2A1O14983 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.91■■□□□ 1.1
ATP2A1O14983 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.91■■□□□ 1.1
ATP2A1O14983 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.91■■□□□ 1.1
ATP2A1O14983 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.91■■□□□ 1.1
ATP2A1O14983 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
ATP2A1O14983 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.91■■□□□ 1.1
ATP2A1O14983 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP2A1O14983 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 SDHAP1-207ENST00000440850 2000 ntBASIC21.9■■□□□ 1.1
ATP2A1O14983 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ATP2A1O14983 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.9■■□□□ 1.1
ATP2A1O14983 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ATP2A1O14983 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.9■■□□□ 1.1
ATP2A1O14983 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.9■■□□□ 1.1
ATP2A1O14983 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ATP2A1O14983 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.9■■□□□ 1.1
ATP2A1O14983 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.9■■□□□ 1.1
ATP2A1O14983 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
ATP2A1O14983 AP000550.4-202ENST00000639755 178 ntBASIC21.9■■□□□ 1.1
ATP2A1O14983 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.9■■□□□ 1.1
ATP2A1O14983 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.9■■□□□ 1.1
ATP2A1O14983 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.9■■□□□ 1.1
ATP2A1O14983 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP2A1O14983 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.9■■□□□ 1.1
ATP2A1O14983 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms