Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
E2F3O00716 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
E2F3O00716 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.69■□□□□ 0.58
E2F3O00716 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
E2F3O00716 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
E2F3O00716 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
E2F3O00716 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.68■□□□□ 0.58
E2F3O00716 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.68■□□□□ 0.58
E2F3O00716 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
E2F3O00716 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.68■□□□□ 0.58
E2F3O00716 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
E2F3O00716 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
E2F3O00716 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.68■□□□□ 0.58
E2F3O00716 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
E2F3O00716 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.68■□□□□ 0.58
E2F3O00716 NBPF21P-201ENST00000425093 1451 ntBASIC18.68■□□□□ 0.58
E2F3O00716 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
E2F3O00716 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
E2F3O00716 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
E2F3O00716 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
E2F3O00716 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
E2F3O00716 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.68■□□□□ 0.58
E2F3O00716 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.68■□□□□ 0.58
E2F3O00716 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
E2F3O00716 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.67■□□□□ 0.58
E2F3O00716 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.67■□□□□ 0.58
E2F3O00716 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.67■□□□□ 0.58
E2F3O00716 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.67■□□□□ 0.58
E2F3O00716 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.67■□□□□ 0.58
E2F3O00716 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 RN7SL471P-201ENST00000580476 299 ntBASIC18.67■□□□□ 0.58
E2F3O00716 MIR4497-201ENST00000583208 89 ntBASIC18.67■□□□□ 0.58
E2F3O00716 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.67■□□□□ 0.58
E2F3O00716 MTDHP1-201ENST00000605323 784 ntBASIC18.67■□□□□ 0.58
E2F3O00716 AC069544.1-201ENST00000609399 999 ntBASIC18.67■□□□□ 0.58
E2F3O00716 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.67■□□□□ 0.58
E2F3O00716 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
E2F3O00716 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
E2F3O00716 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
E2F3O00716 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.67■□□□□ 0.58
E2F3O00716 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
E2F3O00716 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
E2F3O00716 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.66■□□□□ 0.58
E2F3O00716 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
E2F3O00716 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
E2F3O00716 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.66■□□□□ 0.58
E2F3O00716 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.66■□□□□ 0.58
E2F3O00716 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.66■□□□□ 0.58
E2F3O00716 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 KRT17P3-201ENST00000420566 1262 ntBASIC18.66■□□□□ 0.58
E2F3O00716 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.66■□□□□ 0.58
E2F3O00716 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.66■□□□□ 0.58
E2F3O00716 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.66■□□□□ 0.58
E2F3O00716 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 C1QL1P1-201ENST00000568105 661 ntBASIC18.66■□□□□ 0.58
E2F3O00716 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.66■□□□□ 0.58
E2F3O00716 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
E2F3O00716 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.66■□□□□ 0.58
E2F3O00716 FEM1AP3-201ENST00000403722 1741 ntBASIC18.66■□□□□ 0.58
E2F3O00716 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
E2F3O00716 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
E2F3O00716 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.65■□□□□ 0.58
E2F3O00716 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.65■□□□□ 0.58
E2F3O00716 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.65■□□□□ 0.58
E2F3O00716 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.65■□□□□ 0.58
E2F3O00716 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
E2F3O00716 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
E2F3O00716 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
E2F3O00716 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
E2F3O00716 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
E2F3O00716 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms