Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.28■□□□□ 0.52
RTCAO00442 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.28■□□□□ 0.52
RTCAO00442 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTCAO00442 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RTCAO00442 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.27■□□□□ 0.52
RTCAO00442 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RTCAO00442 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 AC004980.1-204ENST00000429707 299 ntBASIC18.27■□□□□ 0.52
RTCAO00442 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 Z85996.1-201ENST00000494644 937 ntBASIC18.27■□□□□ 0.52
RTCAO00442 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTCAO00442 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.27■□□□□ 0.52
RTCAO00442 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.27■□□□□ 0.52
RTCAO00442 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.27■□□□□ 0.52
RTCAO00442 AL353708.3-201ENST00000610272 989 ntBASIC18.27■□□□□ 0.52
RTCAO00442 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.27■□□□□ 0.52
RTCAO00442 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.27■□□□□ 0.52
RTCAO00442 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.27■□□□□ 0.52
RTCAO00442 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
RTCAO00442 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.27■□□□□ 0.52
RTCAO00442 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RTCAO00442 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
RTCAO00442 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTCAO00442 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.27■□□□□ 0.51
RTCAO00442 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTCAO00442 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.27■□□□□ 0.51
RTCAO00442 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.26■□□□□ 0.51
RTCAO00442 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 AL353807.1-201ENST00000427475 662 ntBASIC18.26■□□□□ 0.51
RTCAO00442 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RTCAO00442 KSR1P1-201ENST00000446298 240 ntBASIC18.26■□□□□ 0.51
RTCAO00442 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.26■□□□□ 0.51
RTCAO00442 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.26■□□□□ 0.51
RTCAO00442 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.26■□□□□ 0.51
RTCAO00442 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.26■□□□□ 0.51
RTCAO00442 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 KRT8P41-201ENST00000533985 1514 ntBASIC18.26■□□□□ 0.51
RTCAO00442 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.26■□□□□ 0.51
RTCAO00442 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.26■□□□□ 0.51
RTCAO00442 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.26■□□□□ 0.51
RTCAO00442 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RTCAO00442 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.26■□□□□ 0.51
RTCAO00442 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RTCAO00442 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.26■□□□□ 0.51
RTCAO00442 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTCAO00442 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTCAO00442 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.25■□□□□ 0.51
RTCAO00442 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.25■□□□□ 0.51
RTCAO00442 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RTCAO00442 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTCAO00442 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTCAO00442 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.25■□□□□ 0.51
RTCAO00442 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.25■□□□□ 0.51
RTCAO00442 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.25■□□□□ 0.51
RTCAO00442 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTCAO00442 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.25■□□□□ 0.51
RTCAO00442 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTCAO00442 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.24■□□□□ 0.51
RTCAO00442 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.24■□□□□ 0.51
RTCAO00442 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms