Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 AL513477.1-201ENST00000602865 2407 ntBASIC18.22■□□□□ 0.51
PDLIM1O00151 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.22■□□□□ 0.51
PDLIM1O00151 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDLIM1O00151 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDLIM1O00151 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PDLIM1O00151 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM1O00151 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.21■□□□□ 0.51
PDLIM1O00151 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM1O00151 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM1O00151 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM1O00151 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.21■□□□□ 0.51
PDLIM1O00151 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
PDLIM1O00151 AC046158.3-201ENST00000624947 2558 ntBASIC18.21■□□□□ 0.51
PDLIM1O00151 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM1O00151 RARRES2P4-201ENST00000514074 484 ntBASIC18.21■□□□□ 0.51
PDLIM1O00151 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.21■□□□□ 0.51
PDLIM1O00151 AL121832.2-201ENST00000610979 668 ntBASIC18.21■□□□□ 0.51
PDLIM1O00151 OR10C1-204ENST00000622521 1039 ntBASIC18.21■□□□□ 0.51
PDLIM1O00151 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM1O00151 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM1O00151 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM1O00151 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM1O00151 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM1O00151 KRT16P6-202ENST00000425692 1426 ntBASIC18.21■□□□□ 0.51
PDLIM1O00151 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM1O00151 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM1O00151 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM1O00151 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM1O00151 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDLIM1O00151 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.21■□□□□ 0.5
PDLIM1O00151 AC138932.1-201ENST00000534164 6830 ntBASIC18.2■□□□□ 0.5
PDLIM1O00151 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PDLIM1O00151 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDLIM1O00151 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDLIM1O00151 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDLIM1O00151 GUSBP6-202ENST00000438529 1198 ntBASIC18.2■□□□□ 0.5
PDLIM1O00151 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM1O00151 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM1O00151 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDLIM1O00151 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDLIM1O00151 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
PDLIM1O00151 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM1O00151 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM1O00151 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDLIM1O00151 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM1O00151 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDLIM1O00151 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDLIM1O00151 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.19■□□□□ 0.5
PDLIM1O00151 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM1O00151 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.19■□□□□ 0.5
PDLIM1O00151 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDLIM1O00151 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 GPX1P1-201ENST00000388829 606 ntBASIC18.19■□□□□ 0.5
PDLIM1O00151 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 AL512625.2-201ENST00000417533 625 ntBASIC18.19■□□□□ 0.5
PDLIM1O00151 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 AC083906.2-201ENST00000511578 360 ntBASIC18.19■□□□□ 0.5
PDLIM1O00151 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.19■□□□□ 0.5
PDLIM1O00151 AC087633.2-202ENST00000565166 1439 ntBASIC18.19■□□□□ 0.5
PDLIM1O00151 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM1O00151 AC069236.1-201ENST00000604339 616 ntBASIC18.19■□□□□ 0.5
PDLIM1O00151 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM1O00151 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms