Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL3A8MV65 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL3A8MV65 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL3A8MV65 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL3A8MV65 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 MIR4787-201ENST00000607364 84 ntBASIC18.8■□□□□ 0.6
VGLL3A8MV65 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL3A8MV65 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL3A8MV65 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 TREX1-205ENST00000625293 1783 ntBASIC18.8■□□□□ 0.6
VGLL3A8MV65 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL3A8MV65 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL3A8MV65 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL3A8MV65 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL3A8MV65 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.79■□□□□ 0.6
VGLL3A8MV65 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 AC108860.2-201ENST00000562760 2183 ntBASIC18.79■□□□□ 0.6
VGLL3A8MV65 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VGLL3A8MV65 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.79■□□□□ 0.6
VGLL3A8MV65 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
VGLL3A8MV65 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.79■□□□□ 0.6
VGLL3A8MV65 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.79■□□□□ 0.6
VGLL3A8MV65 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VGLL3A8MV65 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL3A8MV65 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.79■□□□□ 0.6
VGLL3A8MV65 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC18.78■□□□□ 0.6
VGLL3A8MV65 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL3A8MV65 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VGLL3A8MV65 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VGLL3A8MV65 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.77■□□□□ 0.6
VGLL3A8MV65 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VGLL3A8MV65 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VGLL3A8MV65 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.77■□□□□ 0.6
VGLL3A8MV65 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
VGLL3A8MV65 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.77■□□□□ 0.6
VGLL3A8MV65 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.77■□□□□ 0.6
VGLL3A8MV65 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.77■□□□□ 0.6
VGLL3A8MV65 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VGLL3A8MV65 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.77■□□□□ 0.6
VGLL3A8MV65 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VGLL3A8MV65 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.77■□□□□ 0.6
VGLL3A8MV65 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VGLL3A8MV65 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
VGLL3A8MV65 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
VGLL3A8MV65 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VGLL3A8MV65 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
VGLL3A8MV65 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VGLL3A8MV65 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
VGLL3A8MV65 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VGLL3A8MV65 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VGLL3A8MV65 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms