Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.15■□□□□ 0.66
CCDC189A1A4V9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC189A1A4V9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC189A1A4V9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC189A1A4V9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.14■□□□□ 0.65
CCDC189A1A4V9 YBX1P10-201ENST00000444752 975 ntBASIC19.14■□□□□ 0.65
CCDC189A1A4V9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC189A1A4V9 AC008894.3-201ENST00000624324 3103 ntBASIC19.14■□□□□ 0.65
CCDC189A1A4V9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 AC060766.5-201ENST00000590539 871 ntBASIC19.13■□□□□ 0.65
CCDC189A1A4V9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC189A1A4V9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 RPS2P52-201ENST00000469610 820 ntBASIC19.12■□□□□ 0.65
CCDC189A1A4V9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC189A1A4V9 LINC01465-201ENST00000408887 1940 ntBASIC19.12■□□□□ 0.65
CCDC189A1A4V9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC189A1A4V9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms