Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 KRT8P8-201ENST00000434750 1448 ntBASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 KRT17P1-201ENST00000399211 1546 ntBASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 GPX1P1-201ENST00000388829 606 ntBASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 AL512625.2-201ENST00000417533 625 ntBASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV27A0A0K0K1C4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 AC073592.3-201ENST00000625118 1834 ntBASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 MIR638-201ENST00000385237 100 ntBASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 AL390719.1-204ENST00000412397 1219 ntBASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 AC034268.1-201ENST00000441047 882 ntBASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms