Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 KRT8P20-201ENST00000423953 1409 ntBASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 SAPCD2P1-201ENST00000395413 1184 ntBASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 AL031963.3-201ENST00000606441 850 ntBASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 AC233992.3-201ENST00000607491 485 ntBASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 AL356652.1-201ENST00000615962 565 ntBASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.65□□□□□ -0.39
TRAV13-2A0A0B4J235 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV13-2A0A0B4J235 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.65□□□□□ -0.39
TRAV13-2A0A0B4J235 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.65□□□□□ -0.39
TRAV13-2A0A0B4J235 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC12.65□□□□□ -0.39
TRAV13-2A0A0B4J235 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV13-2A0A0B4J235 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV13-2A0A0B4J235 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 AC105265.2-201ENST00000467189 838 ntBASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV13-2A0A0B4J235 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 IRX1P1-201ENST00000438849 1838 ntBASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 PTMA-205ENST00000410064 814 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms